SMTD_0002114601 (Schistosoma mattheei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMTD_0002114601 T236166_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.709 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.709 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.709 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.709 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.709 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.709 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.709 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.709 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.709 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.655 0.375
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.655 0.375
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.655 0.375
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0002114601-mRNA-1 Homeodomain 216 263

Links

Other Homeodomain family TFs
Other Schistosoma mattheei TFs

1147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG005285.1 Alligator sinensis Alligator_sinensis_CCG005285.1 I 0.000
AMAG_05266 Allomyces macrogynus AMAG_05266 I 0.000
CGOC_0001018301 Cylicostephanus goldi CGOC_0001018301 I 0.000
hbx10 Dictyostelium discoideum DDB_G0284293 D 0.000
EFA78939.1 Polysphondylium pallidum EFA78939.1 I 0.000
si:dkey-43p13.5 Danio rerio ENSDARG00000104199 D 0.000
si:dkey-43p13.5 Gasterosteus aculeatus ENSGACG00000014085 I 0.000
ENSGMOG00000003173 Gadus morhua ENSGMOG00000003173 I 0.000
ENSLACG00000013029 Latimeria chalumnae ENSLACG00000013029 I 0.000
ENSLOCG00000001266 Lepisosteus oculatus ENSLOCG00000001266 I 0.000
ENSONIG00000001348 Oreochromis niloticus ENSONIG00000001348 I 0.000
si:dkey-43p13.5 Oryzias latipes ENSORLG00000004744 I 0.000
ENSPFOG00000012326 Poecilia formosa ENSPFOG00000012326 I 0.000
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.000
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.000
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.000
ENSXMAG00000009360 Xiphophorus maculatus ENSXMAG00000009360 I 0.000
estExt_fgeneshPB_pg.C_40740 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_40740 I 0.000
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.000
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.000
fgeneshMC_pg.7_#_205 Mucor circinelloides fgeneshMC_pg.7_#_205 N 0.000
GID1.0049906 Dictyostelium purpureum GID1.0049906 I 0.000
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.000
GLOINDRAFT_59306 Rhizophagus irregularis GLOINDRAFT_59306 I 0.000
GYMLUDRAFT_72414 Gymnopus luxurians GYMLUDRAFT_72414 I 0.000
L596_g24282 Steinernema carpocapsae L596_g24282 I 0.000
L889_g21326 Steinernema feltiae L889_g21326 I 0.000
L892_g28094 Steinernema scapterisci L892_g28094 I 0.000
L893_g29776 Steinernema glaseri L893_g29776 I 0.000
L898_g6571 Steinernema monticolum L898_g6571 I 0.000
LotgiG78457 Lottia gigantea LotgiG78457 I 0.000
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.000
NERG_00880 Nematocida sp NERG_00880 I 0.000
PHACADRAFT_182311 Phanerochaete carnosa PHACADRAFT_182311 N 0.000
PLEOSDRAFT_1011447 Pleurotus ostreatus PLEOSDRAFT_1011447 I 0.000
POSPLDRAFT_91424 Postia placenta POSPLDRAFT_91424 I 0.000
POSPLDRAFT_96600 Postia placenta POSPLDRAFT_96600 I 0.000
RO3G_08755 Rhizopus oryzae RO3G_08755 I 0.000
Sakowv30039034m.g Saccoglossus kowalevskii Sakowv30039034m.g I 0.000
SPPG_03702 Spizellomyces punctatus SPPG_03702 I 0.000
SPPG_05154 Spizellomyces punctatus SPPG_05154 N 0.000
VICG_01325 Vittaforma corneae VICG_01325 I 0.000
XP_002942085 Xenopus tropicalis XP_002942085 I 0.000