CGOC_0001018301 (Cylicostephanus goldi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 CGOC_0001018301 T233328_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
si:dkey-43p13.5
M02082_2.00 		Danio rerio
DNWNWWNWNH
DNWNWWNWNH		 PBM
Weirauch et al.(2014)
pTH6636 		0.676 0.456
Nkx3-2
M00506_2.00 		Mus musculus
NNRAGDRNN
NNYHCTYNN		 PBM
Berger et al.(2008)
Bapx1_2343 		0.604 0.474
NKX3-2
M05012_2.00 		Homo sapiens
NNTAAGTGSN
NSCACTTANN		 SELEX
Yin et al.(2017)
NKX3-2_eDBD_HT-SELEX 		0.604 0.474
NKX3-2
M09138_2.00 		Homo sapiens
TTAAGTGBNH
DNVCACTTAA		 Misc
Kulakovskiy et al.(2013)
NKX32_HUMAN.H11MO.0.C 		0.604 0.474
Nkx3-2
M09212_2.00 		Mus musculus
TTAAGTGBNH
DNVCACTTAA		 Misc
Kulakovskiy et al.(2013)
NKX32_MOUSE.H11MO.0.B 		0.604 0.474
NKX3-2
M10663_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX32_01 		0.604 0.474
NKX3-2
M05013_2.00 		Homo sapiens
NNTAAGTGBN
NVCACTTANN		 SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_1 		0.604 0.474
NKX3-2
M05014_2.00 		Homo sapiens
NTAACGHB
VDCGTTAN		 SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_2 		0.604 0.474
bap
M00560_2.00 		Drosophila melanogaster
NDAAGTRBNN
NNVYACTTHN		 PBM
Busser et al.(2012a)
Bap 		0.600 0.439
bap
M02119_2.00 		Drosophila melanogaster
NYTAAGTRSNN
NNSYACTTARN		 PBM
Weirauch et al.(2014)
pTH5945 		0.600 0.439
bap
M03812_2.00 		Drosophila melanogaster
NNTAAGTGBN
NVCACTTANN		 SELEX
Nitta et al.(2015)
bap_1 		0.600 0.439
bap
M06504_2.00 		Drosophila melanogaster
TTAAGTR
YACTTAA		 B1H
Mathelier et al.(2014)
MA0211.1 		0.600 0.439
bap
M06287_2.00 		Drosophila melanogaster
NBTTAAGTRN
NYACTTAAVN		 B1H
Zhu et al.(2011)
Bap_Cell_FBgn0004862 		0.600 0.439
bap
M06288_2.00 		Drosophila melanogaster
NYTAAKTR
YAMTTARN		 B1H
Zhu et al.(2011)
Bap_SOLEXA_FBgn0004862 		0.600 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CGOC_0001018301-mRNA-1 Homeodomain 30 87

Links

Other Homeodomain family TFs
Other Cylicostephanus goldi TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
si:dkey-43p13.5 Danio rerio ENSDARG00000104199 D 0.676
ENSGMOG00000003173 Gadus morhua ENSGMOG00000003173 I 0.676
si:dkey-43p13.5 Gasterosteus aculeatus ENSGACG00000014085 I 0.672
ENSLACG00000013029 Latimeria chalumnae ENSLACG00000013029 I 0.672
ENSLOCG00000001266 Lepisosteus oculatus ENSLOCG00000001266 I 0.672
ENSONIG00000001348 Oreochromis niloticus ENSONIG00000001348 I 0.672
si:dkey-43p13.5 Oryzias latipes ENSORLG00000004744 I 0.672
ENSPFOG00000012326 Poecilia formosa ENSPFOG00000012326 I 0.672
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.672
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.672
ENSXMAG00000009360 Xiphophorus maculatus ENSXMAG00000009360 I 0.672
Sakowv30039034m.g Saccoglossus kowalevskii Sakowv30039034m.g I 0.672
XP_002942085 Xenopus tropicalis XP_002942085 I 0.672
Alligator_sinensis_CCG005285.1 Alligator sinensis Alligator_sinensis_CCG005285.1 I 0.667
L596_g24282 Steinernema carpocapsae L596_g24282 I 0.649
L889_g21326 Steinernema feltiae L889_g21326 I 0.649
L892_g28094 Steinernema scapterisci L892_g28094 I 0.649
L893_g29776 Steinernema glaseri L893_g29776 I 0.649
L898_g6571 Steinernema monticolum L898_g6571 I 0.649
LotgiG78457 Lottia gigantea LotgiG78457 I 0.644
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.635
POSPLDRAFT_91424 Postia placenta POSPLDRAFT_91424 I 0.622
POSPLDRAFT_96600 Postia placenta POSPLDRAFT_96600 I 0.622
ISCW012498 Ixodes scapularis ISCW012498 N 0.621
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I 0.620
ENSP00000371875 Macaca fascicularis ENSP00000371875 I 0.620
AMAG_05266 Allomyces macrogynus AMAG_05266 I 0.611
AMAG_17748 Allomyces macrogynus AMAG_17748 I 0.611
nkx3-1.L Xenopus laevis XB-GENE-479031 I 0.609
nkx3-1.S Xenopus laevis XB-GENE-6252708 I 0.609
XP_002932598 Xenopus tropicalis XP_002932598 I 0.609
ECANG7_05958 Echinococcus canadensis ECANG7_05958 I 0.605
EmuJ_000969400 Echinococcus multilocularis EmuJ_000969400 I 0.605
HmN_000117000 Hymenolepis microstoma HmN_000117000 I 0.605
HNAJ_0000198401 Hymenolepis nana HNAJ_0000198401 I 0.605
TASK_0000401401 Taenia asiatica TASK_0000401401 I 0.605
TsM_000060800 Taenia solium TsM_000060800 I 0.605
CpipJ_CPIJ004109 Culex pipiens CpipJ_CPIJ004109 I 0.604
AAEL006597 Aedes aegypti AAEL006597 I 0.604
ACYPI002893 Acyrthosiphon pisum ACYPI002893 I 0.604
BGIBMGA010706 Bombyx mori BGIBMGA010706 I 0.604
CPIJ004109 Culex quinquefasciatus CPIJ004109 I 0.604
ENSAMEG00000009342 Ailuropoda melanoleuca ENSAMEG00000009342 I 0.604
ENSAMXG00000003840 Astyanax mexicanus ENSAMXG00000003840 I 0.604
ENSAMXG00000024837 Astyanax mexicanus ENSAMXG00000024837 I 0.604
NKX3-2 Bos taurus ENSBTAG00000010896 I 0.604
NKX3-2 Canis familiaris ENSCAFG00000015412 I 0.604
NKX3-2 Callithrix jacchus ENSCJAG00000012159 I 0.604
NKX3-2 Cavia porcellus ENSCPOG00000005449 I 0.604
ENSCSAG00000016338 Chlorocebus sabaeus ENSCSAG00000016338 I 0.604
nkx3.2 Danio rerio ENSDARG00000037639 I 0.604
NKX3-2 Dasypus novemcinctus ENSDNOG00000043074 I 0.604
ENSEEUG00000012691 Erinaceus europaeus ENSEEUG00000012691 I 0.604
NKX3-2 Homo sapiens ENSG00000109705 D 0.604
nkx3.2 Gasterosteus aculeatus ENSGACG00000016378 I 0.604
NKX3-2 Gorilla gorilla ENSGGOG00000008589 I 0.604
ENSGMOG00000018725 Gadus morhua ENSGMOG00000018725 I 0.604
ENSLACG00000003608 Latimeria chalumnae ENSLACG00000003608 I 0.604
NKX3-2 Loxodonta africana ENSLAFG00000031404 I 0.604
ENSLOCG00000009892 Lepisosteus oculatus ENSLOCG00000009892 I 0.604
ENSLOCG00000015015 Lepisosteus oculatus ENSLOCG00000015015 I 0.604
ENSMICG00000000190 Microcebus murinus ENSMICG00000000190 I 0.604
NKX3-2 Myotis lucifugus ENSMLUG00000008362 I 0.604
ENSMMUG00000022026 Macaca mulatta ENSMMUG00000022026 I 0.604
NKX3-2 Monodelphis domestica ENSMODG00000024753 I 0.604
ENSMPUG00000000476 Mustela putorius furo ENSMPUG00000000476 I 0.604
Nkx3-2 Mus musculus ENSMUSG00000049691 D 0.604
ENSNLEG00000016256 Nomascus leucogenys ENSNLEG00000016256 I 0.604
NKX3-2 Oryctolagus cuniculus ENSOCUG00000009039 I 0.604
NKX3-2 Otolemur garnettii ENSOGAG00000015615 I 0.604
ENSONIG00000002379 Oreochromis niloticus ENSONIG00000002379 I 0.604
ENSOPRG00000005452 Ochotona princeps ENSOPRG00000005452 I 0.604
nkx3.2 Oryzias latipes ENSORLG00000000593 I 0.604
nkx3-1 Oryzias latipes ENSORLG00000010925 I 0.604
ENSPANG00000021310 Papio anubis ENSPANG00000021310 I 0.604
NKX3-2 Procavia capensis ENSPCAG00000013077 I 0.604
ENSPFOG00000002882 Poecilia formosa ENSPFOG00000002882 I 0.604
ENSPPYG00000014611 Pongo abelii ENSPPYG00000014611 I 0.604
ENSPSIG00000012169 Pelodiscus sinensis ENSPSIG00000012169 I 0.604
ENSPTRG00000031253 Pan troglodytes ENSPTRG00000031253 I 0.604
NKX3-2 Pteropus vampyrus ENSPVAG00000002830 I 0.604
Nkx3-2 Rattus norvegicus ENSRNOG00000060782 I 0.604
ENSSSCG00000024594 Sus scrofa ENSSSCG00000024594 I 0.604
ENSSTOG00000021803 Ictidomys tridecemlineatus ENSSTOG00000021803 I 0.604
nkx3.2 Tetraodon nigroviridis ENSTNIG00000015732 I 0.604
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I 0.604
ENSTTRG00000003623 Tursiops truncatus ENSTTRG00000003623 I 0.604
ENSXMAG00000016282 Xiphophorus maculatus ENSXMAG00000016282 I 0.604
HMEL006181 Heliconius melpomene HMEL006181 I 0.604
KGM_11246 Danaus plexippus KGM_11246 I 0.604
MCINX004875 Melitaea cinxia MCINX004875 I 0.604
MESCA006298 Megaselia scalaris MESCA006298 I 0.604
RPRC001122 Rhodnius prolixus RPRC001122 I 0.604
Alligator_sinensis_CCG000534.1 Alligator sinensis Alligator_sinensis_CCG000534.1 I 0.604
Pvit_15821 Pogona vitticeps Pvit_15821 I 0.604
CLEC002956 Cimex lectularius CLEC002956 I 0.604
LCUP000733 Lucilia cuprina LCUP000733 I 0.604
nkx3-3.S Xenopus laevis XB-GENE-865322 I 0.604
nkx3-2 Xenopus tropicalis XB-GENE-876834 I 0.604
nkx3-2.S Xenopus laevis XB-GENE-876836 I 0.604
PPAI010327 Phlebotomus papatasi PPAI010327 I 0.604
ENSPFOG00000004268 Poecilia formosa ENSPFOG00000004268 I 0.602
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.600
bap Drosophila melanogaster FBgn0004862 D 0.600
bap Drosophila simulans FBgn0067504 I 0.600
bap Drosophila sechellia FBgn0067536 I 0.600
GF18600 Drosophila ananassae FBgn0095618 I 0.600
GG24598 Drosophila erecta FBgn0116730 I 0.600
GE25732 Drosophila yakuba FBgn0242790 I 0.600
ACAC_0000925001 Angiostrongylus cantonensis ACAC_0000925001 I 0.600
ACOC_0000191801 Angiostrongylus costaricensis ACOC_0000191801 I 0.600
DICVIV_11804 Dictyocaulus viviparus DICVIV_11804 I 0.600
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N 0.471
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N 0.471
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N 0.471