AMAG_17748 (Allomyces macrogynus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AMAG_17748 T203619_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
si:dkey-43p13.5
M02082_2.00 		Danio rerio
DNWNWWNWNH
DNWNWWNWNH		 PBM
Weirauch et al.(2014)
pTH6636 		0.650 0.404
hbx10
M02074_2.00 		Dictyostelium discoideum
NYAATWWN
NWWATTRN		 PBM
Weirauch et al.(2014)
pTH5547 		0.622 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMAG_17748T0 Homeodomain 162 218

Links

Other Homeodomain family TFs
Other Allomyces macrogynus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAG_05266 Allomyces macrogynus AMAG_05266 I 0.867
POSPLDRAFT_91424 Postia placenta POSPLDRAFT_91424 I 0.718
POSPLDRAFT_96600 Postia placenta POSPLDRAFT_96600 I 0.718
Sakowv30039034m.g Saccoglossus kowalevskii Sakowv30039034m.g I 0.666
SPPG_03702 Spizellomyces punctatus SPPG_03702 I 0.660
si:dkey-43p13.5 Gasterosteus aculeatus ENSGACG00000014085 I 0.654
ENSLACG00000013029 Latimeria chalumnae ENSLACG00000013029 I 0.654
ENSONIG00000001348 Oreochromis niloticus ENSONIG00000001348 I 0.654
si:dkey-43p13.5 Oryzias latipes ENSORLG00000004744 I 0.654
ENSPFOG00000012326 Poecilia formosa ENSPFOG00000012326 I 0.654
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.654
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.654
ENSXMAG00000009360 Xiphophorus maculatus ENSXMAG00000009360 I 0.654
Alligator_sinensis_CCG005285.1 Alligator sinensis Alligator_sinensis_CCG005285.1 I 0.654
si:dkey-43p13.5 Danio rerio ENSDARG00000104199 D 0.650
ENSGMOG00000003173 Gadus morhua ENSGMOG00000003173 I 0.650
ENSLOCG00000001266 Lepisosteus oculatus ENSLOCG00000001266 I 0.650
XP_002942085 Xenopus tropicalis XP_002942085 I 0.650
LotgiG78457 Lottia gigantea LotgiG78457 I 0.644
PLEOSDRAFT_1011447 Pleurotus ostreatus PLEOSDRAFT_1011447 I 0.623
hbx10 Dictyostelium discoideum DDB_G0284293 D 0.622
GID1.0049906 Dictyostelium purpureum GID1.0049906 I 0.622
EFA78939.1 Polysphondylium pallidum EFA78939.1 I 0.622
GLOINDRAFT_59306 Rhizophagus irregularis GLOINDRAFT_59306 I 0.621
RO3G_08755 Rhizopus oryzae RO3G_08755 I 0.616
estExt_fgeneshPB_pg.C_40740 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_40740 I 0.615
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.611
CGOC_0001018301 Cylicostephanus goldi CGOC_0001018301 I 0.611
L596_g24282 Steinernema carpocapsae L596_g24282 I 0.609
L889_g21326 Steinernema feltiae L889_g21326 I 0.609
L892_g28094 Steinernema scapterisci L892_g28094 I 0.609
L893_g29776 Steinernema glaseri L893_g29776 I 0.609
L898_g6571 Steinernema monticolum L898_g6571 I 0.609
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.608
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.608
VICG_01325 Vittaforma corneae VICG_01325 I 0.605
SPPG_05154 Spizellomyces punctatus SPPG_05154 N 0.601
GYMLUDRAFT_72414 Gymnopus luxurians GYMLUDRAFT_72414 I 0.601
PHACADRAFT_182311 Phanerochaete carnosa PHACADRAFT_182311 N 0.601
fgeneshMC_pg.7_#_205 Mucor circinelloides fgeneshMC_pg.7_#_205 N 0.601
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.600
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.599
NERG_00880 Nematocida sp NERG_00880 I 0.599