SSLN_0000482601 (Schistocephalus solidus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SSLN_0000482601 T236445_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.730 0.413
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.730 0.413
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.730 0.413
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.730 0.413
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.730 0.413
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.730 0.413
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.730 0.413
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.730 0.413
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.730 0.413
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.717 0.261
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.717 0.261
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.717 0.261
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0000482601-mRNA-1 Homeodomain 188 233

Links

Other Homeodomain family TFs
Other Schistocephalus solidus TFs

1217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003978 Aedes aegypti AAEL003978 I 0.000
AALB005349 Anopheles albimanus AALB005349 I 0.000
AATE004981 Anopheles atroparvus AATE004981 I 0.000
ACEP27778 Atta cephalotes ACEP27778 I 0.000
ACOM027947 Anopheles coluzzii ACOM027947 I 0.000
ACUA018690 Anopheles culicifacies ACUA018690 I 0.000
ACYPI001198 Acyrthosiphon pisum ACYPI001198 I 0.000
ADAC007927 Anopheles darlingi ADAC007927 I 0.000
AFAF000519 Anopheles farauti AFAF000519 I 0.000
AFUN000435 Anopheles funestus AFUN000435 I 0.000
AGAP005390 Anopheles gambiae AGAP005390 I 0.000
AMAM014424 Anopheles maculatus AMAM014424 I 0.000
AMEC006310 Anopheles melas AMEC006310 I 0.000
AMEM010751 Anopheles merus AMEM010751 I 0.000
AMIN007420 Anopheles minimus AMIN007420 I 0.000
AQUA007695 Anopheles quadriannulatus AQUA007695 I 0.000
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.000
CapteG19364 Capitella teleta CapteG19364 I 0.000
CGI_10005451 Crassostrea gigas CGI_10005451 I 0.000
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.000
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I 0.000
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.000
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I 0.000
Kah Drosophila melanogaster FBgn0035144 D 0.000
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.000
GF25038 Drosophila ananassae FBgn0102030 I 0.000
GG14656 Drosophila erecta FBgn0106912 I 0.000
GH15211 Drosophila grimshawi FBgn0122686 I 0.000
GI16731 Drosophila mojavensis FBgn0139479 I 0.000
GM14272 Drosophila sechellia FBgn0169198 I 0.000
GJ12475 Drosophila virilis FBgn0199717 I 0.000
GK17557 Drosophila willistoni FBgn0219556 I 0.000
GE21016 Drosophila yakuba FBgn0238298 I 0.000
GB42492 Apis mellifera GB42492 I 0.000
HelroG68814 Helobdella robusta HelroG68814 N 0.000
L798_08219 Zootermopsis nevadensis L798_08219 I 0.000
LCUP006416 Lucilia cuprina LCUP006416 I 0.000
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.000
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.000
MDOA000347 Musca domestica MDOA000347 I 0.000
NV16451 Nasonia vitripennis NV16451 I 0.000
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I 0.000
SINV14822 Solenopsis invicta SINV14822 I 0.000
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.000
TC002803 Tribolium castaneum TC002803 I 0.000
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.000
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.000