Bo2g165540 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo2g165540 T239783_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.333 0.381
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.333 0.381
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.333 0.381
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.333 0.381
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.322 0.500
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g165540.1 HSF 43 131

Links

Other HSF family TFs
Other Brassica oleracea TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015342 Calypte anna Aan_R015342 N
Brh_R011790 Buceros rhinoceros Brh_R011790 N
ENSAMEG00000007472 Ailuropoda melanoleuca ENSAMEG00000007472 N
ENSAPLG00000005524 Anas platyrhynchos ENSAPLG00000005524 N
NFX1 Bos taurus ENSBTAG00000012385 N
NFX1 Choloepus hoffmanni ENSCHOG00000009225 N
NFX1 Cavia porcellus ENSCPOG00000003470 N
ENSCSAG00000009971 Chlorocebus sabaeus ENSCSAG00000009971 N
NFX1 Dasypus novemcinctus ENSDNOG00000002079 N
Nfx1 Dipodomys ordii ENSDORG00000001989 N
ENSFALG00000013143 Ficedula albicollis ENSFALG00000013143 N
ENSFCAG00000007905 Felis catus ENSFCAG00000007905 N
NFX1 Homo sapiens ENSG00000086102 N
NFX1 Gorilla gorilla ENSGGOG00000006751 N
ENSGMOG00000006198 Gadus morhua ENSGMOG00000006198 N
ENSLACG00000000769 Latimeria chalumnae ENSLACG00000000769 N
NFX1 Loxodonta africana ENSLAFG00000012270 N
ENSLOCG00000011211 Lepisosteus oculatus ENSLOCG00000011211 N
NFX1 Myotis lucifugus ENSMLUG00000011069 N
NFX1 Monodelphis domestica ENSMODG00000003990 N
ENSMPUG00000004111 Mustela putorius furo ENSMPUG00000004111 N
Nfx1 Mus musculus ENSMUSG00000028423 N
ENSNLEG00000005096 Nomascus leucogenys ENSNLEG00000005096 N
ENSOARG00000009478 Ovis aries ENSOARG00000009478 N
NFX1 Oryctolagus cuniculus ENSOCUG00000008957 N
NFX1 Otolemur garnettii ENSOGAG00000000775 N
ENSONIG00000006192 Oreochromis niloticus ENSONIG00000006192 N
ENSP00000368856 Macaca fascicularis ENSP00000368856 N
ENSP00000368856-D1 Bos grunniens ENSP00000368856-D1 N
ENSPANG00000025304 Papio anubis ENSPANG00000025304 N
ENSPFOG00000012547 Poecilia formosa ENSPFOG00000012547 N
ENSPPYG00000019136 Pongo abelii ENSPPYG00000019136 N
NFX1 Pan troglodytes ENSPTRG00000020858 N
NFX1 Pteropus vampyrus ENSPVAG00000011479 N
Nfx1 Rattus norvegicus ENSRNOG00000009015 N
ENSSHAG00000010272 Sarcophilus harrisii ENSSHAG00000010272 N
ENSXMAG00000001963 Xiphophorus maculatus ENSXMAG00000001963 N
Myotis_brandtii_NFX1_10010343 Myotis brandtii Myotis_brandtii_NFX1_10010343 N
Tal_R011854 Tyto alba Tal_R011854 N
XP_002935327 Xenopus tropicalis XP_002935327 N