HSF5 (Pan troglodytes)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 ENSPTRG00000009453 T240388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF5
M05519_2.00 		Homo sapiens
NRCRTTCTAGAACGYN
NRCGTTCTAGAAYGYN		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_1 		0.680 1.000
HSF5
M05520_2.00 		Homo sapiens
YVGAAYRYNNNNNNNNNBHACRTTCBR
YVGAAYGTDVNNNNNNNNNRYRTTCBR		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_2 		0.680 1.000
HSF5
M05521_2.00 		Homo sapiens
AACRTTCTAGAAYGTT
AACRTTCTAGAAYGTT		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_1 		0.680 1.000
HSF5
M05522_2.00 		Homo sapiens
YRGAAYDYNVNNNNNNNBAACRTTCYR
YRGAAYGTTVNNNNNNNBNRHRTTCYR		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_2 		0.680 1.000
HSFY2
M03326_2.00 		Homo sapiens
WTCGAWNVRWTCGAW
WTCGAWYBNWTCGAW		 SELEX
Jolma et al.(2013)
HSFY2_1 		0.323 0.432
HSFY2
M03327_2.00 		Homo sapiens
CRTTCGAWW
WWTCGAAYG		 SELEX
Jolma et al.(2013)
HSFY2_2 		0.323 0.432
HSFY2
M03328_2.00 		Homo sapiens
DTCGAAHSNWTCGAW
WTCGAWNSDTTCGAH		 SELEX
Jolma et al.(2013)
HSFY2_3 		0.323 0.432
HSFY1
M05515_2.00 		Homo sapiens
NDTVGAAYGWTTCGAAYGB
VCRTTCGAAWCRTTCBAHN		 SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_1 		0.323 0.432
HSFY1
M05516_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_2 		0.323 0.432
HSFY2
M05511_2.00 		Homo sapiens
NDTVGAAYGWTTCGAAYGB
VCRTTCGAAWCRTTCBAHN		 SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_1 		0.323 0.432
HSFY2
M05512_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_2 		0.323 0.432
HSFY1
M05517_2.00 		Homo sapiens
NDTRGAATGTTTRGAATGB
VCATTCYAAACATTCYAHN		 SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_1 		0.323 0.432
HSFY1
M05518_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_2 		0.323 0.432
HSFY2
M05513_2.00 		Homo sapiens
NDWRGAAYGTTTRGAAYGB
VCRTTCYAAACRTTCYWHN		 SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_1 		0.323 0.432
HSFY2
M05514_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_2 		0.323 0.432
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000016053 HSF 14 131

Links

Other HSF family TFs
Other Pan troglodytes TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011514 Oryza indica BGIOSGA011514 N
BGIOSGA020507 Oryza indica BGIOSGA020507 N
BRADI1G29857 Brachypodium distachyon BRADI1G29857 N
BRADI1G76207 Brachypodium distachyon BRADI1G76207 N
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N
F775_22440 Aegilops tauschii F775_22440 N
F775_22671 Aegilops tauschii F775_22671 N
GRMZM2G059428 Zea mays GRMZM2G059428 N
GRMZM2G074358 Zea mays GRMZM2G074358 N
GRMZM2G126817 Zea mays GRMZM2G126817 N
GSMUA_Achr3G00560_001 Musa acuminata GSMUA_Achr3G00560_001 N
GSMUA_Achr3G14720_001 Musa acuminata GSMUA_Achr3G14720_001 N
GSMUA_Achr7G04030_001 Musa acuminata GSMUA_Achr7G04030_001 N
LPERR03G02450 Leersia perrieri LPERR03G02450 N
LPERR06G23420 Leersia perrieri LPERR06G23420 N
MDP0000480581 Malus domestica MDP0000480581 N
MDP0000868556 Malus domestica MDP0000868556 N
MLOC_65456 Hordeum vulgare MLOC_65456 N
OB03G12640 Oryza brachyantha OB03G12640 N
OBART03G02620 Oryza barthii OBART03G02620 N
OBART03G02630 Oryza barthii OBART03G02630 N
OGLUM03G02560 Oryza glumaepatula OGLUM03G02560 N
OGLUM06G29360 Oryza glumaepatula OGLUM06G29360 N
OLONG_016677 Oryza longistaminata OLONG_016677 N
OMERI03G02480 Oryza meridionalis OMERI03G02480 N
OMERI06G27920 Oryza meridionalis OMERI06G27920 N
ONIVA03G02250 Oryza nivara ONIVA03G02250 N
ONIVA06G30950 Oryza nivara ONIVA06G30950 N
OPUNC03G02420 Oryza punctata OPUNC03G02420 N
OPUNC06G25510 Oryza punctata OPUNC06G25510 N
ORGLA03G0024300 Oryza glaberrima ORGLA03G0024300 N
ORGLA06G0236900 Oryza glaberrima ORGLA06G0236900 N
ORUFI03G02380 Oryza rufipogon ORUFI03G02380 N
ORUFI06G29930 Oryza rufipogon ORUFI06G29930 N
OS03G0133000 Oryza sativa OS03G0133000 N
OS06G0726300 Oryza sativa OS06G0726300 N
Pavir.Ia04458 Panicum virgatum Pavir.Ia04458 N
Sb01g048130 Sorghum bicolor Sb01g048130 N
Sb10g030770 Sorghum bicolor Sb10g030770 N
Si006994m.g Setaria italica Si006994m.g N
Si036757m.g Setaria italica Si036757m.g N
TCM_006499 Theobroma cacao TCM_006499 N
Traes_4BL_27B9E4CE6 Triticum aestivum Traes_4BL_27B9E4CE6 N
Traes_4DL_7CB8EC5A8 Triticum aestivum Traes_4DL_7CB8EC5A8 N
Traes_4DL_B29067862 Triticum aestivum Traes_4DL_B29067862 N
TRIUR3_18560 Triticum urartu TRIUR3_18560 N
TRIUR3_32216 Triticum urartu TRIUR3_32216 N
TRIUR3_33949 Triticum urartu TRIUR3_33949 N