OBART09G12750 (Oryza barthii)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 OBART09G12750 T241388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.453 0.713
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.450 0.724
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.450 0.724
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.432 0.690
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.432 0.690
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.423 0.701
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.423 0.701
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.416 0.609
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.416 0.609
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.416 0.609
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.393 0.609
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.371 0.632
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.371 0.632
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.360 0.655
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.360 0.655
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.356 0.575
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.356 0.575
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.351 0.644
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.351 0.644
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G12750.1 HSF 31 121

Links

Other HSF family TFs
Other Oryza barthii TFs

1406 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA040642 Oryza indica BGIOSGA040642 N
BRADI5G01900 Brachypodium distachyon BRADI5G01900 N
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N
Ca_14482 Cicer arietinum Ca_14482 N
Cla019147 Citrullus lanatus Cla019147 N
Cucsa.282100 Cucumis sativus Cucsa.282100 N
F775_04545 Aegilops tauschii F775_04545 N
gene00631-v1.0-hybrid Fragaria vesca gene00631-v1.0-hybrid N
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I
GRMZM2G042893 Zea mays GRMZM2G042893 N
GRMZM2G042895 Zea mays GRMZM2G042895 N
GRMZM2G119823 Zea mays GRMZM2G119823 I
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I
LPERR04G04510 Leersia perrieri LPERR04G04510 N
LPERR04G04520 Leersia perrieri LPERR04G04520 N
mgf019723m Mimulus guttatus mgf019723m I
MLOC_13653 Hordeum vulgare MLOC_13653 N
MLOC_43888 Hordeum vulgare MLOC_43888 N
MLOC_44850 Hordeum vulgare MLOC_44850 N
MLOC_62844 Hordeum vulgare MLOC_62844 N
OBART04G06800 Oryza barthii OBART04G06800 N
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N
OMERI03G04020 Oryza meridionalis OMERI03G04020 N
OMERI03G04040 Oryza meridionalis OMERI03G04040 N
ONIVA01G07170 Oryza nivara ONIVA01G07170 N
OPUNC04G05620 Oryza punctata OPUNC04G05620 N
OPUNC04G05630 Oryza punctata OPUNC04G05630 N
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N
OS04G0300600 Oryza sativa OS04G0300600 N
OS04G0301500 Oryza sativa OS04G0301500 N
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N
Pavir.Ga02257 Panicum virgatum Pavir.Ga02257 N
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N
Pavir.Gb02374 Panicum virgatum Pavir.Gb02374 N
Pavir.J18808 Panicum virgatum Pavir.J18808 N
PDK_20s1308051g001 Phoenix dactylifera PDK_20s1308051g001 N
Pm020879 Prunus mume Pm020879 I
POPTR_0006s07440 Populus trichocarpa POPTR_0006s07440 N
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N
Sb07g004190 Sorghum bicolor Sb07g004190 N
Si010413m.g Setaria italica Si010413m.g N
Si010685m.g Setaria italica Si010685m.g N
Si010812m.g Setaria italica Si010812m.g N
Si019518m.g Setaria italica Si019518m.g I
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N
Traes_2BL_070D9E2AD Triticum aestivum Traes_2BL_070D9E2AD N
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N
Traes_2DL_8BE259F4B Triticum aestivum Traes_2DL_8BE259F4B N
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N
Traes_4DL_55503B3CD Triticum aestivum Traes_4DL_55503B3CD N
Traes_5AL_331CE753D Triticum aestivum Traes_5AL_331CE753D N
Traes_5AL_EDF2DD187 Triticum aestivum Traes_5AL_EDF2DD187 N
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I
TRIUR3_16896 Triticum urartu TRIUR3_16896 N