irf9 (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000008698 T244421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf9
M00173_2.00 		Mus musculus
NNNRAAANN
NNTTTYNNN		 PBM
Badis et al.(2009)
Isgf3g_2853 		0.731 0.731
Irf9
M09240_2.00 		Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC		 Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C 		0.731 0.731
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.721 0.721
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.721 0.721
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.721 0.721
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.721 0.721
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.721 0.721
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.721 0.721
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.721 0.721
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.721 0.721
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.721 0.721
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.721 0.721
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.721 0.721
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.721 0.721
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.721 0.721
IRF9
M02258_2.00 		Sus scrofa
WNYGAAASY
RSTTTCRNW		 PBM
Weirauch et al.(2014)
pTH9287 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000011548 IRF 11 116

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP37 Erinaceus europaeus ENSEEUG00000009884 N 0.000
ZFP37 Echinops telfairi ENSETEG00000010531 N 0.000
ZFP37 Felis catus ENSFCAG00000027135 N 0.000
ZFP37 Myotis lucifugus ENSMLUG00000008711 N 0.000
Zfp37 Mus musculus ENSMUSG00000028389 N 0.000
ENSOARG00000006404 Ovis aries ENSOARG00000006404 N 0.000
ZFP37 Oryctolagus cuniculus ENSOCUG00000029203 N 0.000
ENSP00000363344-D1 Bos grunniens ENSP00000363344-D1 N 0.000
Zfp37 Rattus norvegicus ENSRNOG00000046629 N 0.000
ZFP37 Sorex araneus ENSSARG00000008507 N 0.000
ZFP37 Sus scrofa ENSSSCG00000005475 N 0.000
Myotis_brandtii_ZFP37_10003294 Myotis brandtii Myotis_brandtii_ZFP37_10003294 N 0.000