LFY (Arabidopsis lyrata)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01698 (FLO_LFY) IPR002910 Al_scaffold_0008_2690 T244677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.988 0.988
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.988 0.988
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0008_2690 Leafy 1 396

Links

Other Leafy family TFs
Other Arabidopsis lyrata TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH70718 Xenopus laevis AAH70718 I
Aan_R007004 Calypte anna Aan_R007004 I
Aan_R011644 Calypte anna Aan_R011644 I
Afo_R000236 Aptenodytes forsteri Afo_R000236 I
Afo_R004692 Aptenodytes forsteri Afo_R004692 I
Brh_R000160 Buceros rhinoceros Brh_R000160 I
Brh_R011012 Buceros rhinoceros Brh_R011012 I
Cmyd_10012301 Chelonia mydas Cmyd_10012301 I
Cmyd_10016351 Chelonia mydas Cmyd_10016351 I
ZBTB18 Anolis carolinensis ENSACAG00000004296 I
ENSAMEG00000019750 Ailuropoda melanoleuca ENSAMEG00000019750 I
ENSAMXG00000002993 Astyanax mexicanus ENSAMXG00000002993 I
ENSAPLG00000002367 Anas platyrhynchos ENSAPLG00000002367 I
ZBTB18 Bos taurus ENSBTAG00000000385 I
ZBTB18 Callithrix jacchus ENSCJAG00000017087 I
ENSCPOG00000023254 Cavia porcellus ENSCPOG00000023254 I
zbtb18 Danio rerio ENSDARG00000028228 I
ZBTB18 Dasypus novemcinctus ENSDNOG00000009334 I
ENSDORG00000000569 Dipodomys ordii ENSDORG00000000569 I
ZBTB18 Equus caballus ENSECAG00000018829 I
ZBTB18 Erinaceus europaeus ENSEEUG00000014181 I
ENSFALG00000011473 Ficedula albicollis ENSFALG00000011473 I
ENSFALG00000014898 Ficedula albicollis ENSFALG00000014898 I
ENSFCAG00000026731 Felis catus ENSFCAG00000026731 I
ZBTB18 Homo sapiens ENSG00000179456 D
zbtb18 Gasterosteus aculeatus ENSGACG00000010518 I
ZBTB18 Gallus gallus ENSGALG00000010705 I
ZBTB18 Gorilla gorilla ENSGGOG00000028442 I
ENSGMOG00000018718 Gadus morhua ENSGMOG00000018718 I
ENSLACG00000009889 Latimeria chalumnae ENSLACG00000009889 I
ZBTB18 Loxodonta africana ENSLAFG00000002879 I
ENSLOCG00000017349 Lepisosteus oculatus ENSLOCG00000017349 I
ENSMEUG00000009369 Macropus eugenii ENSMEUG00000009369 I
ZBTB18 Meleagris gallopavo ENSMGAG00000011476 I
ZBTB18 Microcebus murinus ENSMICG00000007600 I
ZBTB18 Myotis lucifugus ENSMLUG00000011285 I
ZBTB18 Macaca mulatta ENSMMUG00000015664 I
ZBTB18 Monodelphis domestica ENSMODG00000006570 I
ENSMPUG00000015734 Mustela putorius furo ENSMPUG00000015734 I
Zbtb18 Mus musculus ENSMUSG00000063659 I
ENSNLEG00000003981 Nomascus leucogenys ENSNLEG00000003981 I
ZBTB18 Ornithorhynchus anatinus ENSOANG00000010257 I
ENSOARG00000005939 Ovis aries ENSOARG00000005939 I
ZBTB18 Oryctolagus cuniculus ENSOCUG00000007968 I
ZBTB18 Otolemur garnettii ENSOGAG00000013580 I
ENSONIG00000000862 Oreochromis niloticus ENSONIG00000000862 I
zbtb18 Oryzias latipes ENSORLG00000004823 I
ENSP00000351539 Macaca fascicularis ENSP00000351539 I
ENSPANG00000021934 Papio anubis ENSPANG00000021934 I
ENSPFOG00000022080 Poecilia formosa ENSPFOG00000022080 I
ENSPPYG00000000059 Pongo abelii ENSPPYG00000000059 I
ENSPSIG00000000487 Pelodiscus sinensis ENSPSIG00000000487 I
ZBTB18 Pan troglodytes ENSPTRG00000002175 I
ZBTB18 Pteropus vampyrus ENSPVAG00000011441 I
Zfp238 Rattus norvegicus ENSRNOG00000004423 I
ZBTB18 Sorex araneus ENSSARG00000002984 I
ENSSHAG00000008659 Sarcophilus harrisii ENSSHAG00000008659 I
ENSSSCG00000030070 Sus scrofa ENSSSCG00000030070 I
ENSSTOG00000004290 Ictidomys tridecemlineatus ENSSTOG00000004290 I
ZBTB18 Taeniopygia guttata ENSTGUG00000008247 I
zbtb18 Tetraodon nigroviridis ENSTNIG00000000430 I
zbtb18 Takifugu rubripes ENSTRUG00000000952 I
ENSTSYG00000004607 Tarsius syrichta ENSTSYG00000004607 I
ZBTB18 Tursiops truncatus ENSTTRG00000000615 I
ENSXMAG00000018241 Xiphophorus maculatus ENSXMAG00000018241 I
Gfo_R006792 Geospiza fortis Gfo_R006792 I
Gfo_R011040 Geospiza fortis Gfo_R011040 I
Myotis_brandtii_ZNF238_10003031 Myotis brandtii Myotis_brandtii_ZNF238_10003031 I
Pvit_01078 Pogona vitticeps Pvit_01078 I
zbtb18 Xenopus tropicalis XB-GENE-1003542 I
zbtb18.L Xenopus laevis XB-GENE-1003548 I
znf238.2.L Xenopus laevis XB-GENE-1219070 I