CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_520047
(
Physcomitrella patens
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
estExt_fgenesh1_pg.C_520047
T244770_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_520047
Leafy
6
347
PVHNMAQFDIVQAEPTALLYKRPDGVALVGRENRRLKELFKDFGVQPSTVAVMGQMGFTLSTLINMKDEEVDFVIKSMIEEYHLDLLMGEQFGIKAAVRAKRRLVEEEMEQQRMDLAARSNEKKRRLEESSDGLLLKDGNGSLEALGLLGLTDPDSDSEGKKVAKRRQRKRRSKEVGEDGEERPREHPFIVTEPGEPAKGKKNGLDYLFDLYEQCGKFLEEVQHIAKEKGEKCPSKVTNEVFRHAKLTGAGYINKPKMRDYVHCYALHCLDVETSNNLRKEYKERGENVGAWCQACYFPLVKLARQNEWDIDDLFNRNDKLRIWYVPTKLRQLCHIERMKHG
Links
Other
Leafy
family TFs
Other
Physcomitrella patens
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m014401
Ricinus communis
30147.m014401
I
0.720
Bo2g161690
Brassica oleracea
Bo2g161690
I
0.702
Bra029305
Brassica rapa
Bra029305
I
0.702
cassava19992.m1
Manihot esculenta
cassava19992.m1
I
0.702
cassava40548.m1
Manihot esculenta
cassava40548.m1
I
0.702
Ca_01386
Cicer arietinum
Ca_01386
I
0.714
chr1.CM0094.750.nd
Lotus japonicus
chr1.CM0094.750.nd
I
0.721
Ciclev10033942m.g
Citrus clementina
Ciclev10033942m.g
I
0.714
Cla019619
Citrullus lanatus
Cla019619
I
0.708
Cucsa.156880
Cucumis sativus
Cucsa.156880
I
0.708
estExt_fgenesh1_pg.C_740147
Physcomitrella patens
estExt_fgenesh1_pg.C_740147
I
0.976
GLYMA06G17170
Glycine max
GLYMA06G17170
I
0.702
Gorai.001G053900
Gossypium raimondii
Gorai.001G053900
I
0.708
Lus10016732.g
Linum usitatissimum
Lus10016732.g
I
0.708
Lus10022427.g
Linum usitatissimum
Lus10022427.g
I
0.708
mgf013601m
Mimulus guttatus
mgf013601m
I
0.714
MTR_3g098560
Medicago truncatula
MTR_3g098560
I
0.708
orange1.1g044766m.g
Citrus sinensis
orange1.1g044766m.g
I
0.714
FL
Populus trichocarpa
POPTR_0015s11820
I
0.702
SapurV1A.2394s0010
Salix purpurea
SapurV1A.2394s0010
I
0.702
SELMODRAFT_417910
Selaginella moellendorffii
SELMODRAFT_417910
N
0.731
SELMODRAFT_85923
Selaginella moellendorffii
SELMODRAFT_85923
I
0.741
Solyc03g118160.1
Solanum lycopersicum
Solyc03g118160.1
I
0.702
TCM_014768
Theobroma cacao
TCM_014768
I
0.708
LFY
Vitis vinifera
VIT_17s0000g00150
I
0.720