estExt_fgenesh1_pg.C_740147 (Physcomitrella patens)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 estExt_fgenesh1_pg.C_740147 T244771_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.702 0.702
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_740147 Leafy 6 348

Links

Other Leafy family TFs
Other Physcomitrella patens TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_520047 Physcomitrella patens estExt_fgenesh1_pg.C_520047 N 0.976
SELMODRAFT_85923 Selaginella moellendorffii SELMODRAFT_85923 I 0.741
SELMODRAFT_417910 Selaginella moellendorffii SELMODRAFT_417910 N 0.726
30147.m014401 Ricinus communis 30147.m014401 I 0.726
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.720
Ca_01386 Cicer arietinum Ca_01386 I 0.720
mgf013601m Mimulus guttatus mgf013601m I 0.720
LFY Vitis vinifera VIT_17s0000g00150 I 0.720
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.720
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.720
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.714
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.714
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.714
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.714
Cla019619 Citrullus lanatus Cla019619 I 0.714
TCM_014768 Theobroma cacao TCM_014768 I 0.714
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.714
Bo2g161690 Brassica oleracea Bo2g161690 I 0.708
Bra029305 Brassica rapa Bra029305 I 0.708
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.708
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.708
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.708
FL Populus trichocarpa POPTR_0015s11820 I 0.708
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.708
Bo3g109270 Brassica oleracea Bo3g109270 I 0.702
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.702
LFY Arabidopsis thaliana AT5G61850 D 0.702
Bra019619 Brassica rapa Bra019619 I 0.702
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.702
LFY Arabidopsis lyrata Al_scaffold_0008_2690 I 0.702
PRUPE_ppa006372mg Prunus persica PRUPE_ppa006372mg I 0.702
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.702
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.702
Eucgr.K02192 Eucalyptus grandis Eucgr.K02192 I 0.702