CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_16s0100g00440
(
Vitis vinifera
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
VIT_16s0100g00440
T246272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_16s0100g00440.t01
LOB
4
102
RCAACKYLRRRCPPDCIFSSYFPSNDPQRFASVHRIYGASNIGKMLQQIPPHLRAEATESMYYEAQCRVADPVYGIVKTISLLNQEIHHAQSQLAKVQA
Links
Other
LOB
family TFs
Other
Vitis vinifera
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006948
Oryza indica
BGIOSGA006948
N
0.000
BRADI3G07160
Brachypodium distachyon
BRADI3G07160
N
0.000
F775_22144
Aegilops tauschii
F775_22144
N
0.000
GRMZM2G143433
Zea mays
GRMZM2G143433
N
0.000
OGLUM02G07430
Oryza glumaepatula
OGLUM02G07430
N
0.000
OMERI02G08460
Oryza meridionalis
OMERI02G08460
N
0.000
ONIVA01G45020
Oryza nivara
ONIVA01G45020
N
0.000
OPUNC06G18940
Oryza punctata
OPUNC06G18940
N
0.000
ORUFI02G07490
Oryza rufipogon
ORUFI02G07490
N
0.000
OS02G0197300
Oryza sativa
OS02G0197300
N
0.000
Pavir.J22770
Panicum virgatum
Pavir.J22770
N
0.000
Pavir.J25515
Panicum virgatum
Pavir.J25515
N
0.000
Sb04g006636
Sorghum bicolor
Sb04g006636
N
0.000
Traes_6AS_74635BB63
Triticum aestivum
Traes_6AS_74635BB63
N
0.000
Traes_6DS_A08A13944
Triticum aestivum
Traes_6DS_A08A13944
N
0.000
TRIUR3_31464
Triticum urartu
TRIUR3_31464
N
0.000