CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm015826
(
Prunus mume
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pm015826
T246377_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm015826
LOB
24
122
ACAACKYQRRRCAKDCPLSPHFPADQPKMFQNAHRLYGVSNIMKIRKQVHPEQQNEAMRSIIYESNMRAKFPVTGCMGIINQLNFQLQQAIEELRYVRT
Links
Other
LOB
family TFs
Other
Prunus mume
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla010520
Citrullus lanatus
Cla010520
N
0.758
Cucsa.158540
Cucumis sativus
Cucsa.158540
N
0.747
gene01286-v1.0-hybrid
Fragaria vesca
gene01286-v1.0-hybrid
N
0.838
MDP0000190306
Malus domestica
MDP0000190306
N
0.869
MDP0000200379
Malus domestica
MDP0000200379
N
0.707
MDP0000280087
Malus domestica
MDP0000280087
N
0.879
MDP0000643230
Malus domestica
MDP0000643230
N
0.707
PRUPE_ppa023282mg
Prunus persica
PRUPE_ppa023282mg
N
1.000