CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene01286-v1.0-hybrid
(
Fragaria vesca
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
gene01286-v1.0-hybrid
T246903_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna01286.1-v1.0-hybrid
LOB
10
108
ACAACKYQRRRCTKDCELAPHFPADQLKQFQNAHRLYGVSNIMKVLKQTGPGKKEEAMRSIIYESNMRAKFPVTGCMGIINQLTFQLQQAYEELRYVRS
Links
Other
LOB
family TFs
Other
Fragaria vesca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000190306
Malus domestica
MDP0000190306
N
0.848
PRUPE_ppa023282mg
Prunus persica
PRUPE_ppa023282mg
N
0.838
Pm015826
Prunus mume
Pm015826
N
0.838
MDP0000280087
Malus domestica
MDP0000280087
N
0.808
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
0.738
Cucsa.158540
Cucumis sativus
Cucsa.158540
N
0.727
Cla010520
Citrullus lanatus
Cla010520
N
0.717