CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.9128s0007
(
Capsella grandiflora
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Cagra.9128s0007
T246745_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.9128s0007.1.p
LOB
58
156
PCAACKILRRRCAEKCVLAPYFPPTDPMKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQV
Links
Other
LOB
family TFs
Other
Capsella grandiflora
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZFP28
Bos taurus
ENSBTAG00000002055
N
0.000
ENSBTAP00000021794-D1
Bos grunniens
ENSBTAP00000021794-D1
N
0.000
ZFP28
Canis familiaris
ENSCAFG00000024289
I
0.000
ZFP28
Callithrix jacchus
ENSCJAG00000020297
I
0.000
ENSCSAG00000001666
Chlorocebus sabaeus
ENSCSAG00000001666
I
0.000
ZFP28
Dasypus novemcinctus
ENSDNOG00000007010
I
0.000
ZFP28
Equus caballus
ENSECAG00000013849
I
0.000
ZFP28
Echinops telfairi
ENSETEG00000002303
I
0.000
ZFP28
Loxodonta africana
ENSLAFG00000010041
I
0.000
ZFP28
Macaca mulatta
ENSMMUG00000021673
I
0.000
ENSMPUG00000006646
Mustela putorius furo
ENSMPUG00000006646
I
0.000
ZFP28
Ochotona princeps
ENSOPRG00000014306
I
0.000
ENSP00000301318
Macaca fascicularis
ENSP00000301318
I
0.000
ENSPANG00000008416
Papio anubis
ENSPANG00000008416
I
0.000
Zfp28
Rattus norvegicus
ENSRNOG00000042777
I
0.000
ZFP28
Sus scrofa
ENSSSCG00000027774
I
0.000
ENSSTOG00000022134
Ictidomys tridecemlineatus
ENSSTOG00000022134
I
0.000