CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G151300
(
Gossypium raimondii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Gorai.004G151300
T246954_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G151300.1
LOB
17
115
PCAACRMLRRRCDSNCILAPYFPGDEPDKFAGVHKVFGASNVIKLIQMVEETNREDAVKALVYEARARLRDPVYGSTGTIFQLQKMVQDLKLQLKSTNA
Links
Other
LOB
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_06535
Fusarium fujikuroi
FFUJ_06535
N
FGRRES_08135
Fusarium graminearum
FGRRES_08135
N
FOXG_02820
Fusarium oxysporum
FOXG_02820
N
FPSE_05458
Fusarium pseudograminearum
FPSE_05458
N
FVEG_01650
Fusarium verticillioides
FVEG_01650
N
GGTG_09579
Gaeumannomyces graminis
GGTG_09579
N
M437DRAFT_64155
Aureobasidium melanogenum
M437DRAFT_64155
N
MGG_06312
Magnaporthe oryzae
MGG_06312
N
S40288_01867
Stachybotrys chartarum
S40288_01867
N