CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.004G151300
(
Gossypium raimondii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Gorai.004G151300
T246954_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G151300.1
LOB
17
115
PCAACRMLRRRCDSNCILAPYFPGDEPDKFAGVHKVFGASNVIKLIQMVEETNREDAVKALVYEARARLRDPVYGSTGTIFQLQKMVQDLKLQLKSTNA
Links
Other
LOB
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.007G110000
Gossypium raimondii
Gorai.007G110000
N
0.879
TCM_005120
Theobroma cacao
TCM_005120
N
0.838
PRUPE_ppa025888mg
Prunus persica
PRUPE_ppa025888mg
N
0.818
Pm018346
Prunus mume
Pm018346
N
0.808
evm.TU.supercontig_96.47
Carica papaya
evm.TU.supercontig_96.47
N
0.798
GLYMA19G44645
Glycine max
GLYMA19G44645
N
0.788
SapurV1A.0054s0370
Salix purpurea
SapurV1A.0054s0370
N
0.788
VIT_15s0046g00230
Vitis vinifera
VIT_15s0046g00230
N
0.768
VIT_15s0046g00240
Vitis vinifera
VIT_15s0046g00240
N
0.768
POPTR_0014s16510
Populus trichocarpa
POPTR_0014s16510
N
0.758
MDP0000223109
Malus domestica
MDP0000223109
N
0.758
28859.m000318
Ricinus communis
28859.m000318
N
0.747
PK11227.1
Cannabis sativa
PK11227.1
N
0.717