MDP0000581845 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000581845 T247131_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000581845 LOB 4 50

Links

Other LOB family TFs
Other Malus domestica TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g055690 Brassica oleracea Bo3g055690 N 0.714
Bra021433 Brassica rapa Bra021433 N 0.714
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.714
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.714
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.833
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.738
Ca_02208 Cicer arietinum Ca_02208 N 0.738
Ca_09342 Cicer arietinum Ca_09342 N 0.738
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.714
Cla020920 Citrullus lanatus Cla020920 N 0.786
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.762
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.714
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.762
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.738
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.714
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.762
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.762
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.786
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.714
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.714
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.714
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.762
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.714
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.714
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.738
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.714
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.714
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.714
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.714
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.714
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.714
MDP0000139025 Malus domestica MDP0000139025 N 0.714
MDP0000247079 Malus domestica MDP0000247079 N 0.714
MDP0000261146 Malus domestica MDP0000261146 N 0.714
MDP0000591819 Malus domestica MDP0000591819 N 0.810
MDP0000794101 Malus domestica MDP0000794101 N 0.810
mgf007319m Mimulus guttatus mgf007319m N 0.714
mgf017790m Mimulus guttatus mgf017790m N 0.714
mgf017960m Mimulus guttatus mgf017960m N 0.714
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.714
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.714
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.762
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.714
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.714
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.714
Pm005389 Prunus mume Pm005389 N 0.833
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.810
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.714
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.714
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.810
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.833
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.714
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.714
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.738
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.738
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.714
Si002412m.g Setaria italica Si002412m.g N 0.714
Si004887m.g Setaria italica Si004887m.g N 0.738
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.714
TCM_034722 Theobroma cacao TCM_034722 N 0.786
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.714
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.762