POPTR_0003s19840 (Populus trichocarpa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 POPTR_0003s19840 T249668_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.941 0.887
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.821 0.606
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s19840.1 MADF 88 165

Links

Other MADF family TFs
Other Populus trichocarpa TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_06639 Schistosoma haematobium A_06639 N
csin112803 Clonorchis sinensis csin112803 N
pbrm1l Danio rerio ENSDARG00000077038 N
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N
pbrm1l Takifugu rubripes ENSTRUG00000005335 N
Sjc_0086690 Schistosoma japonicum Sjc_0086690 N
SMRZ_0001007401 Schistosoma margrebowiei SMRZ_0001007401 N
SROB_0001114901 Schistosoma rodhaini SROB_0001114901 N
T265_08267 Opisthorchis viverrini T265_08267 N