Sb06g015280 (Sorghum bicolor)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Sb06g015280 T249772_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.862 0.625
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.862 0.625
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.862 0.625
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb06g015280.1 MADF 143 221

Links

Other MADF family TFs
Other Sorghum bicolor TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3875_YDR174W Saccharomyces mikatae 3875_YDR174W I
4397_YDR174W Saccharomyces paradoxus 4397_YDR174W I
AGOS_AGL141W Ashbya gossypii AGOS_AGL141W I
BN7_2978 Wickerhamomyces ciferrii BN7_2978 I
CAGL0E00737g Candida glabrata CAGL0E00737g I
Ecym_4194 Eremothecium cymbalariae Ecym_4194 I
GNLVRS01_PISO0I16552g Millerozyma farinosa GNLVRS01_PISO0I16552g N
GNLVRS01_PISO0J18313g Millerozyma farinosa GNLVRS01_PISO0J18313g N
KAFR_0B06030 Kazachstania africana KAFR_0B06030 I
KLTH0F09020g Lachancea thermotolerans KLTH0F09020g I
KLTH0F09020g Kluyveromyces thermotolerans KLTH0F09020g I
KNAG_0A04840 Kazachstania naganishii KNAG_0A04840 I
LALA0_S03e03444g Lachancea lanzarotensis LALA0_S03e03444g I
NCAS_0B03190 Naumovozyma castellii NCAS_0B03190 I
NDAI_0A01190 Naumovozyma dairenensis NDAI_0A01190 I
PAS_chr2-2_0488 Komagataella pastoris PAS_chr2-2_0488 N
SAKL0H14234g Lachancea kluyveri SAKL0H14234g I
Scas_Contig682.13 Saccharomyces castellii Scas_Contig682.13 I
SKUD_149803 Saccharomyces kudriavzevii SKUD_149803 I
SU7_2586 Saccharomyces arboricola SU7_2586 I
TBLA_0A01170 Tetrapisispora blattae TBLA_0A01170 I
TBLA_0H01020 Tetrapisispora blattae TBLA_0H01020 I
TDEL_0F04960 Torulaspora delbrueckii TDEL_0F04960 I
TPHA_0C02460 Tetrapisispora phaffii TPHA_0C02460 I
XP_002491904.1 Pichia pastoris XP_002491904.1 N
HMO1 Saccharomyces cerevisiae YDR174W D
ZBAI_01315 Zygosaccharomyces bailii ZBAI_01315 I
ZBAI_09581 Zygosaccharomyces bailii ZBAI_09581 I
ZYRO0C03718g Zygosaccharomyces rouxii ZYRO0C03718g I