Si009787m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si009787m.g T249811_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.847 0.611
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.847 0.611
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.847 0.611
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si009787m MADF 142 220
Si009844m MADF 142 220
Si009930m MADF 142 220
Si010015m MADF 142 220
Si010138m MADF 142 220

Links

Other MADF family TFs
Other Setaria italica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB06533.1 Alternaria brassicicola AB06533.1 N
AUEXF2481DRAFT_374368 Aureobasidium subglaciale AUEXF2481DRAFT_374368 I
CHGG_07364 Chaetomium globosum CHGG_07364 I
COCC4DRAFT_46985 Bipolaris maydis COCC4DRAFT_46985 N
COCCADRAFT_82274 Bipolaris zeicola COCCADRAFT_82274 N
COCSADRAFT_25239 Bipolaris sorokiniana COCSADRAFT_25239 N
COCVIDRAFT_37014 Bipolaris victoriae COCVIDRAFT_37014 N
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I
estExt_fgenesh1_pg.C_40234 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40234 N
estExt_fgenesh1_pg.C_chr_10960 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10960 I
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I
LEMA_P115290.1 Leptosphaeria maculans LEMA_P115290.1 N
M437DRAFT_67933 Aureobasidium melanogenum M437DRAFT_67933 I
M438DRAFT_155623 Aureobasidium pullulans M438DRAFT_155623 I
MPH_08875 Macrophomina phaseolina MPH_08875 N
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I
Mycgr3G107320 Zymoseptoria tritici Mycgr3G107320 I
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I
PODANS_2_4060 Podospora anserina PODANS_2_4060 I
PTT_02079 Pyrenophora teres PTT_02079 N
PV09_00811 Verruconis gallopava PV09_00811 N
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I
SETTUDRAFT_174289 Setosphaeria turcica SETTUDRAFT_174289 N
THITE_2108095 Thielavia terrestris THITE_2108095 I
UCRNP2_458 Neofusicoccum parvum UCRNP2_458 N
V499_05963 Pseudogymnoascus pannorum V499_05963 I