VIT_08s0058g00200 (Vitis vinifera)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 VIT_08s0058g00200 T249995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.815 0.691
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.815 0.691
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0058g00200.t01 MADF 44 118

Links

Other MADF family TFs
Other Vitis vinifera TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007949 Calypte anna Aan_R007949 N 0.000
Afo_R006305 Aptenodytes forsteri Afo_R006305 N 0.000
Brh_R011091 Buceros rhinoceros Brh_R011091 N 0.000
Cmyd_10013756 Chelonia mydas Cmyd_10013756 N 0.000
ARNTL2 Anolis carolinensis ENSACAG00000012446 N 0.000
ENSAMEG00000011610 Ailuropoda melanoleuca ENSAMEG00000011610 N 0.000
ENSAPLG00000008758 Anas platyrhynchos ENSAPLG00000008758 N 0.000
ARNTL2 Canis familiaris ENSCAFG00000011089 N 0.000
ENSCSAG00000007636 Chlorocebus sabaeus ENSCSAG00000007636 N 0.000
ENSFALG00000003942 Ficedula albicollis ENSFALG00000003942 N 0.000
ARNTL2 Felis catus ENSFCAG00000000386 N 0.000
ARNTL2 Homo sapiens ENSG00000029153 N 0.000
ARNTL2 Gallus gallus ENSGALG00000014096 N 0.000
ENSGMOG00000003843 Gadus morhua ENSGMOG00000003843 N 0.000
ENSLACG00000009646 Latimeria chalumnae ENSLACG00000009646 N 0.000
ENSLOCG00000015224 Lepisosteus oculatus ENSLOCG00000015224 N 0.000
ARNTL2 Meleagris gallopavo ENSMGAG00000013735 N 0.000
ARNTL2 Macaca mulatta ENSMMUG00000023249 N 0.000
ENSMPUG00000010512 Mustela putorius furo ENSMPUG00000010512 N 0.000
ENSNLEG00000005463 Nomascus leucogenys ENSNLEG00000005463 N 0.000
ENSOARG00000019779 Ovis aries ENSOARG00000019779 N 0.000
ARNTL2 Otolemur garnettii ENSOGAG00000011668 N 0.000
ENSP00000266503 Macaca fascicularis ENSP00000266503 N 0.000
ENSPANG00000004474 Papio anubis ENSPANG00000004474 N 0.000
ARNTL2 Procavia capensis ENSPCAG00000008486 N 0.000
ENSPPYG00000004380 Pongo abelii ENSPPYG00000004380 N 0.000
ENSPSIG00000009416 Pelodiscus sinensis ENSPSIG00000009416 N 0.000
ARNTL2 Pan troglodytes ENSPTRG00000004788 N 0.000
ARNTL2 Pteropus vampyrus ENSPVAG00000013771 N 0.000
ENSSTOG00000001344 Ictidomys tridecemlineatus ENSSTOG00000001344 N 0.000
ENSTGUG00000012163 Taeniopygia guttata ENSTGUG00000012163 N 0.000
ENSTSYG00000005541 Tarsius syrichta ENSTSYG00000005541 N 0.000
ARNTL2 Tursiops truncatus ENSTTRG00000012339 N 0.000
Gfo_R015185 Geospiza fortis Gfo_R015185 N 0.000
Ogr07520 Ophisaurus gracilis Ogr07520 N 0.000
Pvit_19389 Pogona vitticeps Pvit_19389 N 0.000
Tal_R011603 Tyto alba Tal_R011603 N 0.000