CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_040_00045
(
Aquilegia coerulea
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Aquca_040_00045
T250577_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_040_00045.1
MADF
893
957
MDERFQVVKGRMVLWEEISEKLLRHGINRSSGQCKSLWTSLIQKYEEERRSGKKSRSWPYYDEME
Aquca_040_00045.2
Myb
875
934
RNKWKVEEVKKLIQMRGEMDERFQVVKGRMVLWEEISEKLLRHGINRSSGQCKSLWTSLI
Aquca_040_00045.3
Myb
875
934
RNKWKVEEVKKLIQMRGEMDERFQVVKGRMVLWEEISEKLLRHGINRSSGQCKSLWTSLI
Aquca_040_00045.4
Myb
745
804
RNKWKVEEVKKLIQMRGEMDERFQVVKGRMVLWEEISEKLLRHGINRSSGQCKSLWTSLI
Links
Other
MADF
family TFs
Other
Aquilegia coerulea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G37020
Glycine max
GLYMA04G37020
N
0.814
GLYMA06G17980
Glycine max
GLYMA06G17980
N
0.788
GLYMA17G13780
Glycine max
GLYMA17G13780
N
0.853
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
0.849
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
0.845
Sb04g005900
Sorghum bicolor
Sb04g005900
N
0.833