CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA17G13780
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
GLYMA17G13780
T271705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G13780.1
MADF
793
857
LNDRFQVVKGRMALWEEISQNLLANGISRSPGQCKSLWTSLLQKYEEVKNEKKNKKKWPYFEDME
GLYMA17G13780.3
Myb
775
834
RNKWKHEEVKKLIDMRGELNDRFQVVKGRMALWEEISQNLLANGISRSPGQCKSLWTSLL
GLYMA17G13780.4
MADF
793
858
LNDRFQVVKGRMALWEEISQNLLANGISRSPGQCKSLWTSLLQKYEQEVKNEKKNKKKWPYFEDME
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.003G119600
Gossypium raimondii
Gorai.003G119600
N
0.918
GLYMA04G37020
Glycine max
GLYMA04G37020
N
0.903
TCM_014612
Theobroma cacao
TCM_014612
N
0.877
PGSC0003DMG401015244
Solanum tuberosum
PGSC0003DMG401015244
N
0.865
Solyc03g111260.2
Solanum lycopersicum
Solyc03g111260.2
N
0.865
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
0.860
Aquca_040_00045
Aquilegia coerulea
Aquca_040_00045
N
0.853
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
0.826
Sb04g005900
Sorghum bicolor
Sb04g005900
N
0.813
GLYMA06G17980
Glycine max
GLYMA06G17980
N
0.736
LjSGA_035337.1
Lotus japonicus
LjSGA_035337.1
N
0.724
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.718
MTR_3g089020
Medicago truncatula
MTR_3g089020
N
0.712
Cucsa.157420
Cucumis sativus
Cucsa.157420
N
0.703
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.676
Bra038629
Brassica rapa
Bra038629
N
0.676
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.676
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.676
Gorai.001G059600
Gossypium raimondii
Gorai.001G059600
N
0.672
cassava17864.valid.m1
Manihot esculenta
cassava17864.valid.m1
N
0.662