Carubv10017646m.g (Capsella rubella)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Carubv10017646m.g T250630_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.934 0.901
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.934 0.901
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10017646m MADF 38 127

Links

Other MADF family TFs
Other Capsella rubella TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_06687 Capronia epimyces A1O3_06687 N 0.000
A1O5_09249 Cladophialophora psammophila A1O5_09249 I 0.000
A1O7_07701 Cladophialophora yegresii A1O7_07701 I 0.000
A1O9_01966 Exophiala aquamarina A1O9_01966 I 0.000
ACRE_004430 Acremonium chrysogenum ACRE_004430 I 0.000
CADANGAG00001377 Aspergillus niger CADANGAG00001377 I 0.000
CMQ_3175 Grosmannia clavigera CMQ_3175 I 0.000
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.000
F503_02949 Ophiostoma piceae uamh F503_02949 I 0.000
FFUJ_04435 Fusarium fujikuroi FFUJ_04435 I 0.000
fgenesh1_pm.00042_#_331 Aspergillus carbonarius fgenesh1_pm.00042_#_331 I 0.000
FGRRES_17238 Fusarium graminearum FGRRES_17238 D 0.000
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.000
FVEG_04119 Fusarium verticillioides FVEG_04119 I 0.000
G647_02381 Cladophialophora carrionii G647_02381 I 0.000
GGTG_02769 Gaeumannomyces graminis GGTG_02769 I 0.000
HMPREF1120_01670 Exophiala dermatitidis HMPREF1120_01670 I 0.000
HMPREF1624_05953 Sporothrix schenckii HMPREF1624_05953 I 0.000
MAPG_01731 Magnaporthe poae MAPG_01731 I 0.000
MYCTH_122893 Myceliophthora thermophila MYCTH_122893 I 0.000
PAAG_02161 Paracoccidioides sp lutzii PAAG_02161 N 0.000
PEX1_081420 Penicillium expansum PEX1_081420 N 0.000
PITC_097210 Penicillium italicum PITC_097210 N 0.000
PV04_08189 Capronia semiimmersa PV04_08189 I 0.000
PV05_09089 Exophiala xenobiotica PV05_09089 I 0.000
PV06_02589 Exophiala oligosperma PV06_02589 I 0.000
PV07_11936 Cladophialophora immunda PV07_11936 I 0.000
PV08_11364 Exophiala spinifera PV08_11364 I 0.000
PV11_06331 Exophiala sideris PV11_06331 I 0.000
SPBR_00057 Sporothrix brasiliensis SPBR_00057 I 0.000
TESG_06518 Trichophyton tonsurans TESG_06518 N 0.000
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.000
UCRNP2_9561 Neofusicoccum parvum UCRNP2_9561 N 0.000
UV8b_5932 Ustilaginoidea virens UV8b_5932 I 0.000
VHEMI03354 Torrubiella hemipterigena VHEMI03354 I 0.000
Z517_03357 Fonsecaea pedrosoi Z517_03357 I 0.000
Z518_06732 Rhinocladiella mackenziei Z518_06732 I 0.000
Z519_05358 Cladophialophora bantiana Z519_05358 I 0.000