HCOI00362100 (Haemonchus contortus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 HCOI00362100 T252013_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08311
M02267_2.00 		Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY		 PBM
Weirauch et al.(2014)
pTH9393 		0.937 0.696
madf-9
M02277_2.00 		Caenorhabditis elegans
VYGCGGAH
DTCCGCRB		 PBM
Weirauch et al.(2014)
pTH8333 		0.937 0.696
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00362100.t1 MADF 49 127

Links

Other MADF family TFs
Other Haemonchus contortus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000053701 Angiostrongylus costaricensis ACOC_0000053701 I 0.966
ANCCAN_19661 Ancylostoma caninum ANCCAN_19661 I 0.962
ANCDUO_20588 Ancylostoma duodenale ANCDUO_20588 I 0.967
ANCDUO_21217 Ancylostoma duodenale ANCDUO_21217 I 0.967
CBG08311 Caenorhabditis briggsae CBG08311 D 0.937
CBN03210 Caenorhabditis brenneri CBN03210 I 0.937
CBN17693 Caenorhabditis brenneri CBN17693 I 0.937
CGOC_0001115201 Cylicostephanus goldi CGOC_0001115201 I 0.940
CJA11982 Caenorhabditis japonica CJA11982 I 0.937
CRE11120 Caenorhabditis remanei CRE11120 I 0.937
DICVIV_09254 Dictyocaulus viviparus DICVIV_09254 I 0.966
HCOI01732900 Haemonchus contortus HCOI01732900 I 0.971
HPBE_0002310201 Heligmosomoides bakeri HPBE_0002310201 I 0.967
HPLM_0002104601 Haemonchus placei HPLM_0002104601 I 0.967
NBR_0000280301 Nippostrongylus brasiliensis NBR_0000280301 I 0.902
OESDEN_02601 Oesophagostomum dentatum OESDEN_02601 I 0.966
OESDEN_17440 Oesophagostomum dentatum OESDEN_17440 I 0.966
scaffold190-EXSNAP2012.38 Pristionchus exspectatus scaffold190-EXSNAP2012.38 I 0.843
TELCIR_18230 Teladorsagia circumcincta TELCIR_18230 I 0.971
madf-9 Caenorhabditis elegans WBGene00022608 D 0.937