BGIOSGA017110 (Oryza indica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BGIOSGA017110 T252999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.792 0.792
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.708 0.708
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.708 0.708
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.708 0.708
Q40882_PETHY
M11003_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP11_01 		0.708 0.708
FBP24_PETHY
M10997_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP24_01 		0.708 0.708
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.708 0.708
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA017110-PA MADS box 10 57

Links

Other MADS box family TFs
Other Oryza indica TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006597 Aedes aegypti AAEL006597 I
ACAC_0000925001 Angiostrongylus cantonensis ACAC_0000925001 I
ACOC_0000191801 Angiostrongylus costaricensis ACOC_0000191801 I
ACYPI002893 Acyrthosiphon pisum ACYPI002893 I
Alligator_sinensis_CCG000534.1 Alligator sinensis Alligator_sinensis_CCG000534.1 I
Alligator_sinensis_CCG005285.1 Alligator sinensis Alligator_sinensis_CCG005285.1 I
AMAG_05266 Allomyces macrogynus AMAG_05266 I
AMAG_17748 Allomyces macrogynus AMAG_17748 I
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N
BGIBMGA010706 Bombyx mori BGIBMGA010706 I
CLEC002956 Cimex lectularius CLEC002956 I
CPIJ004109 Culex quinquefasciatus CPIJ004109 I
CpipJ_CPIJ004109 Culex pipiens CpipJ_CPIJ004109 I
DICVIV_11804 Dictyocaulus viviparus DICVIV_11804 I
ECANG7_05958 Echinococcus canadensis ECANG7_05958 I
EmuJ_000969400 Echinococcus multilocularis EmuJ_000969400 I
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I
ENSAMEG00000009342 Ailuropoda melanoleuca ENSAMEG00000009342 I
ENSAMXG00000003840 Astyanax mexicanus ENSAMXG00000003840 I
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I
ENSAMXG00000024837 Astyanax mexicanus ENSAMXG00000024837 I
NKX3-2 Bos taurus ENSBTAG00000010896 I
NKX3-2 Canis familiaris ENSCAFG00000015412 I
NKX3-2 Callithrix jacchus ENSCJAG00000012159 I
NKX3-2 Cavia porcellus ENSCPOG00000005449 I
ENSCSAG00000016338 Chlorocebus sabaeus ENSCSAG00000016338 I
nkx3.2 Danio rerio ENSDARG00000037639 I
si:dkey-43p13.5 Danio rerio ENSDARG00000104199 D
NKX3-2 Dasypus novemcinctus ENSDNOG00000043074 I
ENSEEUG00000012691 Erinaceus europaeus ENSEEUG00000012691 I
NKX3-2 Homo sapiens ENSG00000109705 D
si:dkey-43p13.5 Gasterosteus aculeatus ENSGACG00000014085 I
nkx3.2 Gasterosteus aculeatus ENSGACG00000016378 I
NKX3-2 Gorilla gorilla ENSGGOG00000008589 I
ENSGMOG00000003173 Gadus morhua ENSGMOG00000003173 I
ENSGMOG00000018725 Gadus morhua ENSGMOG00000018725 I
ENSLACG00000003608 Latimeria chalumnae ENSLACG00000003608 I
ENSLACG00000013029 Latimeria chalumnae ENSLACG00000013029 I
NKX3-2 Loxodonta africana ENSLAFG00000031404 I
ENSLOCG00000001266 Lepisosteus oculatus ENSLOCG00000001266 I
ENSLOCG00000009892 Lepisosteus oculatus ENSLOCG00000009892 I
ENSLOCG00000015015 Lepisosteus oculatus ENSLOCG00000015015 I
ENSMICG00000000190 Microcebus murinus ENSMICG00000000190 I
NKX3-2 Myotis lucifugus ENSMLUG00000008362 I
ENSMMUG00000022026 Macaca mulatta ENSMMUG00000022026 I
NKX3-2 Monodelphis domestica ENSMODG00000024753 I
ENSMPUG00000000476 Mustela putorius furo ENSMPUG00000000476 I
Nkx3-2 Mus musculus ENSMUSG00000049691 D
ENSNLEG00000016256 Nomascus leucogenys ENSNLEG00000016256 I
NKX3-2 Oryctolagus cuniculus ENSOCUG00000009039 I
NKX3-2 Otolemur garnettii ENSOGAG00000015615 I
ENSONIG00000001348 Oreochromis niloticus ENSONIG00000001348 I
ENSONIG00000002379 Oreochromis niloticus ENSONIG00000002379 I
ENSOPRG00000005452 Ochotona princeps ENSOPRG00000005452 I
nkx3.2 Oryzias latipes ENSORLG00000000593 I
si:dkey-43p13.5 Oryzias latipes ENSORLG00000004744 I
nkx3-1 Oryzias latipes ENSORLG00000010925 I
ENSP00000371875 Macaca fascicularis ENSP00000371875 I
ENSPANG00000021310 Papio anubis ENSPANG00000021310 I
NKX3-2 Procavia capensis ENSPCAG00000013077 I
ENSPFOG00000002882 Poecilia formosa ENSPFOG00000002882 I
ENSPFOG00000004268 Poecilia formosa ENSPFOG00000004268 I
ENSPFOG00000012326 Poecilia formosa ENSPFOG00000012326 I
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I
ENSPPYG00000014611 Pongo abelii ENSPPYG00000014611 I
ENSPSIG00000012169 Pelodiscus sinensis ENSPSIG00000012169 I
ENSPTRG00000031253 Pan troglodytes ENSPTRG00000031253 I
NKX3-2 Pteropus vampyrus ENSPVAG00000002830 I
Nkx3-2 Rattus norvegicus ENSRNOG00000060782 I
ENSSSCG00000024594 Sus scrofa ENSSSCG00000024594 I
ENSSTOG00000021803 Ictidomys tridecemlineatus ENSSTOG00000021803 I
nkx3.2 Tetraodon nigroviridis ENSTNIG00000015732 I
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I
MICALL2 Takifugu rubripes ENSTRUG00000013527 I
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I
ENSTTRG00000003623 Tursiops truncatus ENSTTRG00000003623 I
ENSXMAG00000009360 Xiphophorus maculatus ENSXMAG00000009360 I
ENSXMAG00000016282 Xiphophorus maculatus ENSXMAG00000016282 I
bap Drosophila melanogaster FBgn0004862 D
bap Drosophila simulans FBgn0067504 I
bap Drosophila sechellia FBgn0067536 I
GF18600 Drosophila ananassae FBgn0095618 I
GG24598 Drosophila erecta FBgn0116730 I
GE25732 Drosophila yakuba FBgn0242790 I
HMEL006181 Heliconius melpomene HMEL006181 I
HmN_000117000 Hymenolepis microstoma HmN_000117000 I
HNAJ_0000198401 Hymenolepis nana HNAJ_0000198401 I
ISCW012498 Ixodes scapularis ISCW012498 N
KGM_11246 Danaus plexippus KGM_11246 I
L596_g24282 Steinernema carpocapsae L596_g24282 I
L889_g21326 Steinernema feltiae L889_g21326 I
L892_g28094 Steinernema scapterisci L892_g28094 I
L893_g29776 Steinernema glaseri L893_g29776 I
L898_g6571 Steinernema monticolum L898_g6571 I
LCUP000733 Lucilia cuprina LCUP000733 I
LotgiG78457 Lottia gigantea LotgiG78457 I
MCINX004875 Melitaea cinxia MCINX004875 I
MESCA006298 Megaselia scalaris MESCA006298 I
POSPLDRAFT_91424 Postia placenta POSPLDRAFT_91424 I
POSPLDRAFT_96600 Postia placenta POSPLDRAFT_96600 I
PPAI010327 Phlebotomus papatasi PPAI010327 I
Pvit_15821 Pogona vitticeps Pvit_15821 I
RPRC001122 Rhodnius prolixus RPRC001122 I
Sakowv30039034m.g Saccoglossus kowalevskii Sakowv30039034m.g I
TASK_0000401401 Taenia asiatica TASK_0000401401 I
TsM_000060800 Taenia solium TsM_000060800 I
nkx3-1.L Xenopus laevis XB-GENE-479031 I
nkx3-1.S Xenopus laevis XB-GENE-6252708 I
nkx3-3.S Xenopus laevis XB-GENE-865322 I
nkx3-2 Xenopus tropicalis XB-GENE-876834 I
nkx3-2.S Xenopus laevis XB-GENE-876836 I
XP_002932598 Xenopus tropicalis XP_002932598 I
XP_002942085 Xenopus tropicalis XP_002942085 I