Bo5g065750 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo5g065750 T253125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL63
M06982_2.00 		Arabidopsis thaliana
TDCCAAAAWHGGMAA
TTKCCDWTTTTGGHA		 Dap-seq
OMalley et al.(2016)
AGL63_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g065750.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brassica oleracea TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL63 Arabidopsis thaliana AT1G31140 D 0.708
Bostr.15697s0422 Boechera stricta Bostr.15697s0422 I 0.708
ENSMICG00000005703 Microcebus murinus ENSMICG00000005703 I 0.711
Mef2c Mus musculus ENSMUSG00000005583 D 0.739