Bra016544 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra016544 T253287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016544.1-P MADS box 10 57

Links

Other MADS box family TFs
Other Brassica rapa TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAC59864 Xenopus laevis AAC59864 I 0.000
Alligator_sinensis_CCG010361.1 Alligator sinensis Alligator_sinensis_CCG010361.1 I 0.000
Cmyd_10017062 Chelonia mydas Cmyd_10017062 I 0.000
ENSAMEG00000007114 Ailuropoda melanoleuca ENSAMEG00000007114 I 0.000
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.000
KLF9 Bos taurus ENSBTAG00000016229 I 0.000
ENSBTAP00000021593-D1 Bos grunniens ENSBTAP00000021593-D1 I 0.000
KLF9 Callithrix jacchus ENSCJAG00000001575 I 0.000
ENSCPOG00000005302 Cavia porcellus ENSCPOG00000005302 I 0.000
ENSCSAG00000008358 Chlorocebus sabaeus ENSCSAG00000008358 I 0.000
klf9 Danio rerio ENSDARG00000068194 I 0.000
KLF9 Dasypus novemcinctus ENSDNOG00000018839 I 0.000
KLF9 Equus caballus ENSECAG00000024925 I 0.000
KLF9 Homo sapiens ENSG00000119138 D 0.000
klf9 Gasterosteus aculeatus ENSGACG00000010668 I 0.000
KLF9 Gallus gallus ENSGALG00000027374 I 0.000
KLF9 Gorilla gorilla ENSGGOG00000025900 I 0.000
ENSGMOG00000017411 Gadus morhua ENSGMOG00000017411 I 0.000
ENSLACG00000004995 Latimeria chalumnae ENSLACG00000004995 I 0.000
KLF9 Loxodonta africana ENSLAFG00000027506 I 0.000
ENSLOCG00000009508 Lepisosteus oculatus ENSLOCG00000009508 I 0.000
KLF9 Microcebus murinus ENSMICG00000001056 I 0.000
KLF9 Myotis lucifugus ENSMLUG00000002809 I 0.000
ENSMMUG00000000225 Macaca mulatta ENSMMUG00000000225 I 0.000
KLF9 Monodelphis domestica ENSMODG00000002760 I 0.000
ENSMPUG00000009506 Mustela putorius furo ENSMPUG00000009506 I 0.000
Klf9 Mus musculus ENSMUSG00000033863 D 0.000
ENSNLEG00000000826 Nomascus leucogenys ENSNLEG00000000826 I 0.000
KLF9 Ornithorhynchus anatinus ENSOANG00000005024 I 0.000
ENSOARG00000012896 Ovis aries ENSOARG00000012896 I 0.000
KLF9 Oryctolagus cuniculus ENSOCUG00000006343 I 0.000
KLF9 Otolemur garnettii ENSOGAG00000030356 I 0.000
ENSONIG00000011790 Oreochromis niloticus ENSONIG00000011790 N 0.000
ENSORLG00000010690 Oryzias latipes ENSORLG00000010690 I 0.000
ENSP00000366330 Macaca fascicularis ENSP00000366330 I 0.000
ENSPANG00000025104 Papio anubis ENSPANG00000025104 I 0.000
KLF9 Procavia capensis ENSPCAG00000003811 I 0.000
ENSPPYG00000019284 Pongo abelii ENSPPYG00000019284 I 0.000
ENSPSIG00000009426 Pelodiscus sinensis ENSPSIG00000009426 I 0.000
KLF9 Pan troglodytes ENSPTRG00000040619 I 0.000
KLF9 Pteropus vampyrus ENSPVAG00000005970 I 0.000
Klf9 Rattus norvegicus ENSRNOG00000014215 I 0.000
ENSSHAG00000011337 Sarcophilus harrisii ENSSHAG00000011337 I 0.000
KLF9 Sus scrofa ENSSSCG00000021646 I 0.000
ENSSTOG00000000238 Ictidomys tridecemlineatus ENSSTOG00000000238 I 0.000
KLF9 Tupaia belangeri ENSTBEG00000007044 I 0.000
ENSTRUG00000000453 Takifugu rubripes ENSTRUG00000000453 I 0.000
ENSTSYG00000008257 Tarsius syrichta ENSTSYG00000008257 I 0.000
KLF9 Tursiops truncatus ENSTTRG00000001149 I 0.000
ENSXMAG00000001428 Xiphophorus maculatus ENSXMAG00000001428 I 0.000
estExt_fgenesh2_pg.C_5760011 Branchiostoma floridae estExt_fgenesh2_pg.C_5760011 I 0.000
Myotis_brandtii_KLF9_10034438 Myotis brandtii Myotis_brandtii_KLF9_10034438 I 0.000
Ogr17781 Ophisaurus gracilis Ogr17781 I 0.000
Pvit_02178 Pogona vitticeps Pvit_02178 I 0.000
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I 0.000
klf9 Xenopus tropicalis XB-GENE-483889 I 0.000
klf9.L Xenopus laevis XB-GENE-865026 I 0.000