Klf9 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000033863 T101114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Klf9
M00777_2.00		 Mus musculus
NCCGTTAN
NTAACGGN		 PBM
Weirauch et al.(2013)
pTH2353		 (Direct) (Direct)
Klf9
M10345_2.00		 Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF9
M08088_2.00 		Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN		 ChIP-seq
Mathelier et al.(2014)
MA1107.1 		0.827 1.000
KLF9
M08880_2.00 		Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN		 Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C 		0.827 1.000
KLF13
M02903_2.00 		Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH		 SELEX
Jolma et al.(2013)
KLF13_1 		0.765 0.841
KLF13
M04537_2.00 		Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX 		0.765 0.841
KLF13
M04539_2.00 		Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX 		0.765 0.841
KLF13
M04538_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX 		0.765 0.841
KLF13
M04540_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX 		0.765 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00777_2.00 C2H2 ZF 16 40
M00777_2.00 C2H2 ZF 46 70
M00777_2.00 C2H2 ZF 76 98

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000045639 C2H2 ZF 143 167
ENSMUSP00000045639 C2H2 ZF 173 197
ENSMUSP00000045639 C2H2 ZF 203 225

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007114 Ailuropoda melanoleuca ENSAMEG00000007114 I 0.827
KLF9 Bos taurus ENSBTAG00000016229 I 0.827
KLF9 Callithrix jacchus ENSCJAG00000001575 I 0.827
ENSCPOG00000005302 Cavia porcellus ENSCPOG00000005302 I 0.827
ENSCSAG00000008358 Chlorocebus sabaeus ENSCSAG00000008358 I 0.827
KLF9 Dasypus novemcinctus ENSDNOG00000018839 I 0.827
KLF9 Equus caballus ENSECAG00000024925 I 0.827
KLF9 Homo sapiens ENSG00000119138 D 0.827
KLF9 Gallus gallus ENSGALG00000027374 I 0.827
KLF9 Gorilla gorilla ENSGGOG00000025900 I 0.827
KLF9 Loxodonta africana ENSLAFG00000027506 I 0.827
KLF9 Microcebus murinus ENSMICG00000001056 I 0.827
KLF9 Myotis lucifugus ENSMLUG00000002809 I 0.827
ENSMMUG00000000225 Macaca mulatta ENSMMUG00000000225 I 0.827
KLF9 Monodelphis domestica ENSMODG00000002760 I 0.827
ENSMPUG00000009506 Mustela putorius furo ENSMPUG00000009506 I 0.827
ENSNLEG00000000826 Nomascus leucogenys ENSNLEG00000000826 I 0.827
KLF9 Ornithorhynchus anatinus ENSOANG00000005024 I 0.827
ENSOARG00000012896 Ovis aries ENSOARG00000012896 I 0.827
KLF9 Oryctolagus cuniculus ENSOCUG00000006343 I 0.827
KLF9 Otolemur garnettii ENSOGAG00000030356 I 0.827
ENSPANG00000025104 Papio anubis ENSPANG00000025104 I 0.827
KLF9 Procavia capensis ENSPCAG00000003811 I 0.827
ENSPPYG00000019284 Pongo abelii ENSPPYG00000019284 I 0.827
ENSPSIG00000009426 Pelodiscus sinensis ENSPSIG00000009426 I 0.827
KLF9 Pan troglodytes ENSPTRG00000040619 I 0.827
KLF9 Pteropus vampyrus ENSPVAG00000005970 I 0.827
Klf9 Rattus norvegicus ENSRNOG00000014215 I 0.827
ENSSHAG00000011337 Sarcophilus harrisii ENSSHAG00000011337 I 0.827
KLF9 Sus scrofa ENSSSCG00000021646 I 0.827
ENSSTOG00000000238 Ictidomys tridecemlineatus ENSSTOG00000000238 I 0.827
KLF9 Tupaia belangeri ENSTBEG00000007044 I 0.827
ENSTSYG00000008257 Tarsius syrichta ENSTSYG00000008257 I 0.827
KLF9 Tursiops truncatus ENSTTRG00000001149 I 0.827
Alligator_sinensis_CCG010361.1 Alligator sinensis Alligator_sinensis_CCG010361.1 I 0.827
Cmyd_10017062 Chelonia mydas Cmyd_10017062 I 0.827
ENSBTAP00000021593-D1 Bos grunniens ENSBTAP00000021593-D1 I 0.827
ENSP00000366330 Macaca fascicularis ENSP00000366330 I 0.827
Myotis_brandtii_KLF9_10034438 Myotis brandtii Myotis_brandtii_KLF9_10034438 I 0.827
Ogr17781 Ophisaurus gracilis Ogr17781 I 0.827
Pvit_02178 Pogona vitticeps Pvit_02178 I 0.827
ENSLACG00000004995 Latimeria chalumnae ENSLACG00000004995 I 0.811
AAC59864 Xenopus laevis AAC59864 I 0.811
klf9 Xenopus tropicalis XB-GENE-483889 I 0.811
klf9.L Xenopus laevis XB-GENE-865026 I 0.811
ENSLOCG00000009508 Lepisosteus oculatus ENSLOCG00000009508 I 0.791
ENSGMOG00000017411 Gadus morhua ENSGMOG00000017411 I 0.779
ENSORLG00000010690 Oryzias latipes ENSORLG00000010690 I 0.779
ENSPFOG00000008405 Poecilia formosa ENSPFOG00000008405 I 0.779
ENSTRUG00000000453 Takifugu rubripes ENSTRUG00000000453 I 0.779
ENSAMXG00000000331 Astyanax mexicanus ENSAMXG00000000331 I 0.775
klf13 Danio rerio ENSDARG00000061368 I 0.775
klf9 Danio rerio ENSDARG00000068194 I 0.775
ENSGACG00000010739 Gasterosteus aculeatus ENSGACG00000010739 I 0.775
ENSLOCG00000014806 Lepisosteus oculatus ENSLOCG00000014806 I 0.775
ENSONIG00000015310 Oreochromis niloticus ENSONIG00000015310 I 0.775
ENSPFOG00000004556 Poecilia formosa ENSPFOG00000004556 I 0.775
klf13 Tetraodon nigroviridis ENSTNIG00000008397 I 0.775
ENSXMAG00000003301 Xiphophorus maculatus ENSXMAG00000003301 I 0.775
klf13 Takifugu rubripes ENSTRUG00000011759 I 0.774
ENSXMAG00000001428 Xiphophorus maculatus ENSXMAG00000001428 I 0.773
klf9 Gasterosteus aculeatus ENSGACG00000010668 I 0.771
ENSGMOG00000002059 Gadus morhua ENSGMOG00000002059 I 0.771
klf13 Oryzias latipes ENSORLG00000007542 I 0.771
ENSLACG00000018298 Latimeria chalumnae ENSLACG00000018298 I 0.767
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.766
ENSACAG00000003119 Anolis carolinensis ENSACAG00000003119 I 0.765
ENSAPLG00000006681 Anas platyrhynchos ENSAPLG00000006681 I 0.765
KLF13 Callithrix jacchus ENSCJAG00000017617 I 0.765
ENSCSAG00000006853 Chlorocebus sabaeus ENSCSAG00000006853 I 0.765
KLF13 Homo sapiens ENSG00000169926 D 0.765
ENSGALG00000026590 Gallus gallus ENSGALG00000026590 I 0.765
KLF13 Meleagris gallopavo ENSMGAG00000004699 I 0.765
ENSNLEG00000007555 Nomascus leucogenys ENSNLEG00000007555 I 0.765
ENSOARG00000016409 Ovis aries ENSOARG00000016409 I 0.765
ENSOGAG00000026529 Otolemur garnettii ENSOGAG00000026529 I 0.765
zgc:153115 Oryzias latipes ENSORLG00000008372 I 0.765
KLF13 Procavia capensis ENSPCAG00000009647 I 0.765
ENSPSIG00000014849 Pelodiscus sinensis ENSPSIG00000014849 I 0.765
KLF13 Pan troglodytes ENSPTRG00000006860 I 0.765
KLF13 Sus scrofa ENSSSCG00000026006 I 0.765
ENSSTOG00000022758 Ictidomys tridecemlineatus ENSSTOG00000022758 I 0.765
KLF13 Taeniopygia guttata ENSTGUG00000005470 I 0.765
Aan_R015091 Calypte anna Aan_R015091 I 0.765
Afo_R014961 Aptenodytes forsteri Afo_R014961 I 0.765
Gfo_R008822 Geospiza fortis Gfo_R008822 I 0.765
Ogr16901 Ophisaurus gracilis Ogr16901 I 0.765
Pvit_17363 Pogona vitticeps Pvit_17363 I 0.765
Tal_R011003 Tyto alba Tal_R011003 I 0.765
ENSOANG00000010450 Ornithorhynchus anatinus ENSOANG00000010450 I 0.764
TC000837 Tribolium castaneum TC000837 I 0.764
klf13 Xenopus tropicalis XB-GENE-479837 I 0.764
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I 0.763
Klf13 Mus musculus ENSMUSG00000052040 I 0.761
zgc:153115 Gasterosteus aculeatus ENSGACG00000016005 I 0.759
ENSGMOG00000017987 Gadus morhua ENSGMOG00000017987 I 0.759
zgc:153115 Tetraodon nigroviridis ENSTNIG00000007828 I 0.759
zgc:153115 Takifugu rubripes ENSTRUG00000003801 I 0.759