fgenesh1_pg.C_scaffold_8001596 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 fgenesh1_pg.C_scaffold_8001596 T254004_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8001596 MADS box 6 51

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G55690 Arabidopsis thaliana AT5G55690 N 0.932
AGL82 Arabidopsis thaliana AT5G58890 N 0.733
Bo3g021400 Brassica oleracea Bo3g021400 N 0.750
Bostr.26833s0688 Boechera stricta Bostr.26833s0688 N 1.000
Bra002611 Brassica rapa Bra002611 N 0.727
Bra028965 Brassica rapa Bra028965 N 0.727
Cagra.0891s0086 Capsella grandiflora Cagra.0891s0086 N 0.702
Cagra.6942s0024 Capsella grandiflora Cagra.6942s0024 N 0.977
Carubv10027564m.g Capsella rubella Carubv10027564m.g N 0.977
Carubv10027979m.g Capsella rubella Carubv10027979m.g N 0.702
AGL82 Arabidopsis lyrata scaffold_802501.1 N 0.750
Thhalv10015661m.g Eutrema salsugineum Thhalv10015661m.g N 0.860