Cagra.0891s0086 (Capsella grandiflora)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cagra.0891s0086 T257666_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0891s0086.1.p MADS box 10 56

Links

Other MADS box family TFs
Other Capsella grandiflora TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10027979m.g Capsella rubella Carubv10027979m.g N 1.000
Bostr.26833s0357 Boechera stricta Bostr.26833s0357 N 0.957
AGL82 Arabidopsis lyrata scaffold_802501.1 N 0.936
AGL82 Arabidopsis thaliana AT5G58890 N 0.933
Thhalv10015500m.g Eutrema salsugineum Thhalv10015500m.g N 0.894
Bra002611 Brassica rapa Bra002611 N 0.872
Bo9g135720 Brassica oleracea Bo9g135720 N 0.809
Thhalv10015661m.g Eutrema salsugineum Thhalv10015661m.g N 0.767
Bo3g021400 Brassica oleracea Bo3g021400 N 0.745
Bra028965 Brassica rapa Bra028965 N 0.745
AT5G55690 Arabidopsis thaliana AT5G55690 N 0.702
fgenesh1_pg.C_scaffold_8001596 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001596 N 0.702
Bostr.26833s0688 Boechera stricta Bostr.26833s0688 N 0.702
Cagra.6942s0024 Capsella grandiflora Cagra.6942s0024 N 0.702
Carubv10027564m.g Capsella rubella Carubv10027564m.g N 0.702