CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26833s0357
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.26833s0357
T257620_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26833s0357.1.p
MADS box
10
56
RIAKDKTRITTYKKRKANLYKKAAEFSTLCGVETCLIVYGPTKATDE
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0891s0086
Capsella grandiflora
Cagra.0891s0086
N
0.957
Carubv10027979m.g
Capsella rubella
Carubv10027979m.g
N
0.957
AGL82
Arabidopsis lyrata
scaffold_802501.1
N
0.915
AGL82
Arabidopsis thaliana
AT5G58890
N
0.894
Thhalv10015500m.g
Eutrema salsugineum
Thhalv10015500m.g
N
0.872
Bra002611
Brassica rapa
Bra002611
N
0.851
Bo9g135720
Brassica oleracea
Bo9g135720
N
0.787
Bo3g021400
Brassica oleracea
Bo3g021400
N
0.723
Bra028965
Brassica rapa
Bra028965
N
0.723
Thhalv10015661m.g
Eutrema salsugineum
Thhalv10015661m.g
N
0.721