GMDG_00759 (Pseudogymnoascus destructans)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GMDG_00759 T254257_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.771 0.771
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.771 0.771
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ELR10001 MADS box 10 57

Links

Other MADS box family TFs
Other Pseudogymnoascus destructans TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRE5 Arabidopsis thaliana AT3G28857 N 0.000
PRE1 Arabidopsis thaliana AT5G39860 N 0.000
Bo2g146500 Brassica oleracea Bo2g146500 N 0.000
Bo7g086990 Brassica oleracea Bo7g086990 N 0.000
Bo9g008670 Brassica oleracea Bo9g008670 N 0.000
Bostr.10058s0009 Boechera stricta Bostr.10058s0009 N 0.000
Bra025358 Brassica rapa Bra025358 N 0.000
Bra028443 Brassica rapa Bra028443 N 0.000
Bra033063 Brassica rapa Bra033063 N 0.000
Gorai.005G139900 Gossypium raimondii Gorai.005G139900 N 0.000
scaffold_500871.1 Arabidopsis lyrata scaffold_500871.1 N 0.000
PRE1 Arabidopsis lyrata scaffold_704049.1 N 0.000
Thhalv10005197m.g Eutrema salsugineum Thhalv10005197m.g N 0.000
Thhalv10028074m.g Eutrema salsugineum Thhalv10028074m.g N 0.000