H102_05233 (Trichophyton rubrum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 H102_05233 T254437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EZF40849 MADS box 10 57

Links

Other MADS box family TFs
Other Trichophyton rubrum TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001093601 Angiostrongylus cantonensis ACAC_0001093601 I
ACOC_0000846801 Angiostrongylus costaricensis ACOC_0000846801 I
ANCCAN_04319 Ancylostoma caninum ANCCAN_04319 I
ANCCEY_00577 Ancylostoma ceylanicum ANCCEY_00577 I
CGOC_0000858101 Cylicostephanus goldi CGOC_0000858101 I
DICVIV_02775 Dictyocaulus viviparus DICVIV_02775 I
HCOI01121900 Haemonchus contortus HCOI01121900 I
HPBE_0002474001 Heligmosomoides bakeri HPBE_0002474001 I
HPLM_0001857601 Haemonchus placei HPLM_0001857601 I
NBR_0000263101 Nippostrongylus brasiliensis NBR_0000263101 I
NBR_0000299801 Nippostrongylus brasiliensis NBR_0000299801 I
NECAME_04511 Necator americanus NECAME_04511 I
PPA14541 Pristionchus pacificus PPA14541 I
scaffold60-EXSNAP2012.12 Pristionchus exspectatus scaffold60-EXSNAP2012.12 I
SVUK_0000451101 Strongylus vulgaris SVUK_0000451101 I
TELCIR_07248 Teladorsagia circumcincta TELCIR_07248 I
TELCIR_11314 Teladorsagia circumcincta TELCIR_11314 I