CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g043650
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_8g043650
T254828_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET02583
MADS box
17
64
KMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
262 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_027820
Albugo laibachii
ALNC14_027820
N
estExt_fgenesh1_kg.C_2620004
Phytophthora capsici
estExt_fgenesh1_kg.C_2620004
N
fgenesh_scip_prom.28083.3966
Phytophthora lateralis
fgenesh_scip_prom.28083.3966
N
fgenesh_scip_prom.46568.5520
Phytophthora kernoviae
fgenesh_scip_prom.46568.5520
N
HpaG806957
Hyaloperonospora arabidopsidis
HpaG806957
N
maker-pag1_scaffold_198-snap-gene-0.19
Pythium aphanidermatum
maker-pag1_scaffold_198-snap-gene-0.19
N
maker-par_contig_1574-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1574-fgenesh-gene-0.1
N
maker-pir_contig_91-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_91-fgenesh-gene-0.1
N
maker-piw_contig_312-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_312-fgenesh-gene-0.2
N
maker-pve_contig_65-fgenesh-gene-0.18
Pythium vexans
maker-pve_contig_65-fgenesh-gene-0.18
N
Phyra78502
Phytophthora ramorum
Phyra78502
N
Physo127993
Phytophthora sojae
Physo127993
N
PITG_19177
Phytophthora infestans
PITG_19177
N
PYU1_G011596
Pythium ultimum
PYU1_G011596
N
SPRG_08759
Saprolegnia parasitica
SPRG_08759
N