CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G40380
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC01G40380
T255296_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G40380.1
MADS box
10
58
LIANQRTRATTYKKRKAGLIKKAGELATLCDIPVAVVCAGPDGGAPTVW
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000269
Oryza indica
BGIOSGA000269
N
0.958
LPERR01G36030
Leersia perrieri
LPERR01G36030
N
0.708
OBART01G41560
Oryza barthii
OBART01G41560
N
0.958
OGLUM01G45730
Oryza glumaepatula
OGLUM01G45730
N
0.979
OLONG_001193
Oryza longistaminata
OLONG_001193
N
0.958
OMERI01G38510
Oryza meridionalis
OMERI01G38510
N
0.958
ONIVA01G46660
Oryza nivara
ONIVA01G46660
N
0.958
ORGLA01G0355000
Oryza glaberrima
ORGLA01G0355000
N
0.958
ORUFI01G44910
Oryza rufipogon
ORUFI01G44910
N
0.958