CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA03G0104600
(
Oryza glaberrima
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORGLA03G0104600
T255376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0104600.1
MADS box
16
65
KCGDKKVRDACFSKRHTTIFNKANELAILCGVMVAVVFVSPNANGGIFSF
Links
Other
MADS box
family TFs
Other
Oryza glaberrima
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010877
Calypte anna
Aan_R010877
N
Afo_R009710
Aptenodytes forsteri
Afo_R009710
N
Alligator_sinensis_CCG020716.1
Alligator sinensis
Alligator_sinensis_CCG020716.1
N
ENSAMXG00000010244
Astyanax mexicanus
ENSAMXG00000010244
N
ENSAPLG00000011121
Anas platyrhynchos
ENSAPLG00000011121
N
ENSAPLG00000016290
Anas platyrhynchos
ENSAPLG00000016290
N
l3mbtl3
Danio rerio
ENSDARG00000025983
N
l3mbtl1b
Danio rerio
ENSDARG00000074346
N
ENSFALG00000001349
Ficedula albicollis
ENSFALG00000001349
N
ENSFALG00000011622
Ficedula albicollis
ENSFALG00000011622
N
l3mbtl1b
Gasterosteus aculeatus
ENSGACG00000009206
N
ENSGALG00000001345
Gallus gallus
ENSGALG00000001345
N
ENSGMOG00000015112
Gadus morhua
ENSGMOG00000015112
N
ENSLACG00000008848
Latimeria chalumnae
ENSLACG00000008848
N
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
ENSLOCG00000003008
Lepisosteus oculatus
ENSLOCG00000003008
N
ENSLOCG00000004154
Lepisosteus oculatus
ENSLOCG00000004154
N
ENSLOCG00000004175
Lepisosteus oculatus
ENSLOCG00000004175
N
ENSLOCG00000017277
Lepisosteus oculatus
ENSLOCG00000017277
N
ENSMGAG00000002349
Meleagris gallopavo
ENSMGAG00000002349
N
ENSONIG00000006099
Oreochromis niloticus
ENSONIG00000006099
N
l3mbtl1b
Oryzias latipes
ENSORLG00000009102
N
ENSPFOG00000016946
Poecilia formosa
ENSPFOG00000016946
N
ENSPSIG00000008427
Pelodiscus sinensis
ENSPSIG00000008427
N
ENSTGUG00000000758
Taeniopygia guttata
ENSTGUG00000000758
N
L3MBTL3
Taeniopygia guttata
ENSTGUG00000011709
N
l3mbtl1b
Tetraodon nigroviridis
ENSTNIG00000018364
N
l3mbtl1b
Takifugu rubripes
ENSTRUG00000008264
N
ENSXMAG00000013080
Xiphophorus maculatus
ENSXMAG00000013080
N
Gfo_R008942
Geospiza fortis
Gfo_R008942
N
Gfo_R016211
Geospiza fortis
Gfo_R016211
N
Ogr03652
Ophisaurus gracilis
Ogr03652
N
Pvit_13740
Pogona vitticeps
Pvit_13740
N
Tal_R003526
Tyto alba
Tal_R003526
N
l3mbtl3
Xenopus tropicalis
XB-GENE-1219135
N
l3mbtl3.S
Xenopus laevis
XB-GENE-1219139
N