CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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l3mbtl1b
(
Gasterosteus aculeatus
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
ENSGACG00000009206
T159015_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000012154
C2HC ZF
553
582
GCPTRGCNGVGHIRGPRYGTHYTQVSCPYS
Links
Other
C2HC ZF
family TFs
Other
Gasterosteus aculeatus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000006099
Oreochromis niloticus
ENSONIG00000006099
N
0.966
l3mbtl1b
Oryzias latipes
ENSORLG00000009102
N
0.966
ENSPFOG00000016946
Poecilia formosa
ENSPFOG00000016946
N
0.966
l3mbtl1b
Tetraodon nigroviridis
ENSTNIG00000018364
N
0.966
l3mbtl1b
Takifugu rubripes
ENSTRUG00000008264
N
0.966
ENSXMAG00000013080
Xiphophorus maculatus
ENSXMAG00000013080
N
0.966
l3mbtl1b
Danio rerio
ENSDARG00000074346
N
0.931
ENSGMOG00000015112
Gadus morhua
ENSGMOG00000015112
N
0.931
ENSLOCG00000004154
Lepisosteus oculatus
ENSLOCG00000004154
N
0.931
ENSLOCG00000004175
Lepisosteus oculatus
ENSLOCG00000004175
N
0.931
ENSAMXG00000005528
Astyanax mexicanus
ENSAMXG00000005528
N
0.897
ENSLACG00000008848
Latimeria chalumnae
ENSLACG00000008848
N
0.828
ENSPSIG00000008427
Pelodiscus sinensis
ENSPSIG00000008427
N
0.793
Ogr03652
Ophisaurus gracilis
Ogr03652
N
0.793
Tal_R003526
Tyto alba
Tal_R003526
N
0.793
ENSAPLG00000016290
Anas platyrhynchos
ENSAPLG00000016290
N
0.759
ENSFALG00000001349
Ficedula albicollis
ENSFALG00000001349
N
0.759
ENSGALG00000001345
Gallus gallus
ENSGALG00000001345
N
0.759
ENSMGAG00000002349
Meleagris gallopavo
ENSMGAG00000002349
N
0.759
ENSTGUG00000000758
Taeniopygia guttata
ENSTGUG00000000758
N
0.759
Afo_R009710
Aptenodytes forsteri
Afo_R009710
N
0.759
Alligator_sinensis_CCG020716.1
Alligator sinensis
Alligator_sinensis_CCG020716.1
N
0.759
Gfo_R008942
Geospiza fortis
Gfo_R008942
N
0.759
Pvit_13740
Pogona vitticeps
Pvit_13740
N
0.759
l3mbtl3
Xenopus tropicalis
XB-GENE-1219135
N
0.759
l3mbtl3.S
Xenopus laevis
XB-GENE-1219139
N
0.759
Aan_R010877
Calypte anna
Aan_R010877
N
0.724