ORGLA12G0089800 (Oryza glaberrima)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORGLA12G0089800 T255416_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA12G0089800.1 MADS box 13 60

Links

Other MADS box family TFs
Other Oryza glaberrima TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29801.m003163 Ricinus communis 29801.m003163 N
30170.m013700 Ricinus communis 30170.m013700 N
AMTR_s00017p00226990 Amborella trichopoda AMTR_s00017p00226990 N
cassava46929.m1 Manihot esculenta cassava46929.m1 N
cassava47360.m1 Manihot esculenta cassava47360.m1 N
Ca_16375 Cicer arietinum Ca_16375 N
Ciclev10003973m.g Citrus clementina Ciclev10003973m.g N
Gorai.002G135000 Gossypium raimondii Gorai.002G135000 N
GSMUA_Achr9G08780_001 Musa acuminata GSMUA_Achr9G08780_001 N
mgf020647m Mimulus guttatus mgf020647m N
orange1.1g038084m.g Citrus sinensis orange1.1g038084m.g N
PGSC0003DMG400025780 Solanum tuberosum PGSC0003DMG400025780 N
PGSC0003DMG400025781 Solanum tuberosum PGSC0003DMG400025781 N
PGSC0003DMG400025782 Solanum tuberosum PGSC0003DMG400025782 N
PGSC0003DMG400025783 Solanum tuberosum PGSC0003DMG400025783 N
Pm021290 Prunus mume Pm021290 N
RGE1 Populus trichocarpa POPTR_0001s31250 N
PRUPE_ppa022683mg Prunus persica PRUPE_ppa022683mg N
SapurV1A.0005s1150 Salix purpurea SapurV1A.0005s1150 N
SapurV1A.0643s0100 Salix purpurea SapurV1A.0643s0100 N
Solyc01g107950.1 Solanum lycopersicum Solyc01g107950.1 N
Solyc01g107960.2 Solanum lycopersicum Solyc01g107960.2 N
TCM_007083 Theobroma cacao TCM_007083 N
TCM_033803 Theobroma cacao TCM_033803 N
RGE1 Vitis vinifera VIT_03s0063g00170 N
VIT_18s0001g10300 Vitis vinifera VIT_18s0001g10300 N