CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30170.m013700
(
Ricinus communis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
30170.m013700
T047922_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30170.m013700
bHLH
32
82
EHEAHILTERERRKKMRTMFTNLHALLPQLPAKADKSTIVDEAIKYVRTLE
Links
Other
bHLH
family TFs
Other
Ricinus communis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000484847
Malus domestica
MDP0000484847
N
0.894
BHLH95
Arabidopsis thaliana
AT1G49770
N
0.883
Bo5g076460
Brassica oleracea
Bo5g076460
N
0.883
Bo6g018390
Brassica oleracea
Bo6g018390
N
0.883
Bra018796
Brassica rapa
Bra018796
N
0.883
Bra040671
Brassica rapa
Bra040671
N
0.883
RGE1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1003696
N
0.883
PRUPE_ppa018148mg
Prunus persica
PRUPE_ppa018148mg
N
0.883
Bostr.26675s0191
Boechera stricta
Bostr.26675s0191
N
0.883
Cagra.2481s0020
Capsella grandiflora
Cagra.2481s0020
N
0.883
Carubv10011964m.g
Capsella rubella
Carubv10011964m.g
N
0.883
gene24577-v1.0-hybrid
Fragaria vesca
gene24577-v1.0-hybrid
N
0.883
Pavir.J18412
Panicum virgatum
Pavir.J18412
N
0.883
Thhalv10012185m.g
Eutrema salsugineum
Thhalv10012185m.g
N
0.883
AMTR_s00017p00226990
Amborella trichopoda
AMTR_s00017p00226990
N
0.879
RGE1
Populus trichocarpa
POPTR_0001s31250
N
0.879
SapurV1A.0005s1150
Salix purpurea
SapurV1A.0005s1150
N
0.879
SapurV1A.0643s0100
Salix purpurea
SapurV1A.0643s0100
N
0.879
Pm005302
Prunus mume
Pm005302
N
0.870
cassava46929.m1
Manihot esculenta
cassava46929.m1
N
0.870
cassava47360.m1
Manihot esculenta
cassava47360.m1
N
0.870
SELMODRAFT_424152
Selaginella moellendorffii
SELMODRAFT_424152
N
0.864
SELMODRAFT_446556
Selaginella moellendorffii
SELMODRAFT_446556
N
0.864
MDP0000713910
Malus domestica
MDP0000713910
N
0.864
GSMUA_Achr9G08780_001
Musa acuminata
GSMUA_Achr9G08780_001
N
0.859
PRUPE_ppa022683mg
Prunus persica
PRUPE_ppa022683mg
N
0.859
TCM_007083
Theobroma cacao
TCM_007083
N
0.859
TCM_033803
Theobroma cacao
TCM_033803
N
0.859
RGE1
Vitis vinifera
VIT_03s0063g00170
N
0.859
VIT_18s0001g10300
Vitis vinifera
VIT_18s0001g10300
N
0.859
Pm021290
Prunus mume
Pm021290
N
0.859
29801.m003163
Ricinus communis
29801.m003163
N
0.859
Gorai.002G135000
Gossypium raimondii
Gorai.002G135000
N
0.859
GLYMA02G11500
Glycine max
GLYMA02G11500
N
0.852
Eucgr.G01493
Eucalyptus grandis
Eucgr.G01493
N
0.852
Gorai.013G045100
Gossypium raimondii
Gorai.013G045100
N
0.852
PGSC0003DMG400025780
Solanum tuberosum
PGSC0003DMG400025780
N
0.843
PGSC0003DMG400025783
Solanum tuberosum
PGSC0003DMG400025783
N
0.843
Solyc01g057300.1
Solanum lycopersicum
Solyc01g057300.1
N
0.843
Solyc01g107950.1
Solanum lycopersicum
Solyc01g107950.1
N
0.843
SapurV1A.0423s0120
Salix purpurea
SapurV1A.0423s0120
N
0.843
Si009419m.g
Setaria italica
Si009419m.g
N
0.840