CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0387300
(
Oryza sativa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OS04G0387300
T255514_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0387300-01
MADS box
20
63
AGGICFRKRLAGLEKKAEELAVLCDAHVGFVVLSCSDDDRLHHF
Links
Other
MADS box
family TFs
Other
Oryza sativa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA016270
Oryza indica
BGIOSGA016270
N
0.729
LPERR04G07290
Leersia perrieri
LPERR04G07290
N
0.723
OBART04G10400
Oryza barthii
OBART04G10400
N
0.833
OBART04G10420
Oryza barthii
OBART04G10420
N
0.743
OGLUM04G10090
Oryza glumaepatula
OGLUM04G10090
N
0.833
OGLUM04G10110
Oryza glumaepatula
OGLUM04G10110
N
0.729
OLONG_018307
Oryza longistaminata
OLONG_018307
N
0.729
OMERI04G09520
Oryza meridionalis
OMERI04G09520
N
0.771
ONIVA04G08280
Oryza nivara
ONIVA04G08280
N
0.833
ONIVA04G08300
Oryza nivara
ONIVA04G08300
N
0.750
OPUNC04G08530
Oryza punctata
OPUNC04G08530
N
0.729
ORGLA02G0342800
Oryza glaberrima
ORGLA02G0342800
N
0.833
ORGLA02G0353300
Oryza glaberrima
ORGLA02G0353300
N
0.750
ORGLA04G0074800
Oryza glaberrima
ORGLA04G0074800
N
0.750
ORUFI04G11600
Oryza rufipogon
ORUFI04G11600
N
0.729