OMERI04G09520 (Oryza meridionalis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OMERI04G09520 T255177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G09520.1 MADS box 11 60
OMERI04G09520.2 MADS box 11 60
OMERI04G09520.4 MADS box 11 60
OMERI04G09520.5 MADS box 11 60
OMERI04G09520.6 MADS box 69 119
OMERI04G09520.8 MADS box 69 119

Links

Other MADS box family TFs
Other Oryza meridionalis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA04G08300 Oryza nivara ONIVA04G08300 N 0.979
ORGLA02G0353300 Oryza glaberrima ORGLA02G0353300 N 0.979
ORGLA04G0074800 Oryza glaberrima ORGLA04G0074800 N 0.979
BGIOSGA016270 Oryza indica BGIOSGA016270 N 0.958
OGLUM04G10110 Oryza glumaepatula OGLUM04G10110 N 0.958
OLONG_018307 Oryza longistaminata OLONG_018307 N 0.958
ORUFI04G11600 Oryza rufipogon ORUFI04G11600 N 0.958
OBART04G10400 Oryza barthii OBART04G10400 N 0.938
OGLUM04G10090 Oryza glumaepatula OGLUM04G10090 N 0.938
ONIVA04G08280 Oryza nivara ONIVA04G08280 N 0.938
OPUNC04G08530 Oryza punctata OPUNC04G08530 N 0.938
ORGLA02G0342800 Oryza glaberrima ORGLA02G0342800 N 0.938
LPERR04G07290 Leersia perrieri LPERR04G07290 N 0.851
OBART04G10420 Oryza barthii OBART04G10420 N 0.829
OS04G0387300 Oryza sativa OS04G0387300 N 0.771
Traes_2AL_0C169500B Triticum aestivum Traes_2AL_0C169500B N 0.750
Traes_2BL_ABBC40952 Triticum aestivum Traes_2BL_ABBC40952 N 0.729
F775_33065 Aegilops tauschii F775_33065 N 0.708
Traes_2DL_3C9A3DD05 Triticum aestivum Traes_2DL_3C9A3DD05 N 0.708