evm.TU.supercontig_43.109 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_43.109 T258250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_43.109 MADS box 12 62

Links

Other MADS box family TFs
Other Carica papaya TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH104 Arabidopsis thaliana AT4G14410 D
Bo1g102270 Brassica oleracea Bo1g102270 I
Bo4g126940 Brassica oleracea Bo4g126940 I
Bo7g040830 Brassica oleracea Bo7g040830 I
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I
Bra014923 Brassica rapa Bra014923 I
Bra041033 Brassica rapa Bra041033 I
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I
Ca_23174 Cicer arietinum Ca_23174 I
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I
Cla021854 Citrullus lanatus Cla021854 I
Cucsa.255290 Cucumis sativus Cucsa.255290 I
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I
GLYMA10G01010 Glycine max GLYMA10G01010 I
GLYMA20G22010 Glycine max GLYMA20G22010 I
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I
Lus10022186.g Linum usitatissimum Lus10022186.g I
MTR_1g043430 Medicago truncatula MTR_1g043430 I
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I