CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_054570
Acremonium chrysogenum
ACRE_054570
N
Bcin02g08310
Botrytis cinerea
Bcin02g08310
N
CFIO01_08071
Colletotrichum fioriniae
CFIO01_08071
N
CGGC5_3607
Colletotrichum gloeosporioides
CGGC5_3607
N
CH063_08900
Colletotrichum higginsianum
CH063_08900
N
Cob_05888
Colletotrichum orbiculare
Cob_05888
N
CSUB01_01660
Colletotrichum sublineola
CSUB01_01660
N
CTHT_0048430
Chaetomium thermophilum
CTHT_0048430
N
estExt_Genewise1.C_100108
Cryphonectria parasitica
estExt_Genewise1.C_100108
N
FFUJ_13620
Fusarium fujikuroi
FFUJ_13620
N
fgenesh1_pm.sca_3_chr4_2_0000036
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000036
N
FGRRES_06382
Fusarium graminearum
FGRRES_06382
N
FPSE_05827
Fusarium pseudograminearum
FPSE_05827
N
GGTG_05245
Gaeumannomyces graminis
GGTG_05245
N
GLRG_06776
Colletotrichum graminicola
GLRG_06776
N
GMDG_04399
Pseudogymnoascus destructans
GMDG_04399
N
MAC_07589
Metarhizium acridum
MAC_07589
N
MAJ_08773
Metarhizium majus
MAJ_08773
N
MANI_028863
Metarhizium anisopliae
MANI_028863
N
MAPG_03623
Magnaporthe poae
MAPG_03623
N
MBR_08228
Metarhizium brunneum
MBR_08228
N
MGG_09562
Magnaporthe oryzae
MGG_09562
N
MGU_03399
Metarhizium guizhouense
MGU_03399
N
NCU02386
Neurospora crassa
NCU02386
N
NechaG92421
Fusarium solani
NechaG92421
N
OCS_00747
Ophiocordyceps sinensis
OCS_00747
N
OCS_04593
Ophiocordyceps sinensis
OCS_04593
N
PFICI_03549
Pestalotiopsis fici
PFICI_03549
N
PV09_03404
Verruconis gallopava
PV09_03404
N
SBOR_2961
Sclerotinia borealis
SBOR_2961
N
TRIATDRAFT_293053
Trichoderma atroviride
TRIATDRAFT_293053
N
TRIREDRAFT_60897
Trichoderma reesei
TRIREDRAFT_60897
N
TRIVIDRAFT_74205
Trichoderma virens
TRIVIDRAFT_74205
N
UCREL1_9565
Eutypa lata
UCREL1_9565
N
V499_02769
Pseudogymnoascus pannorum
V499_02769
N
VDAG_09459
Verticillium dahliae
VDAG_09459
N
VHEMI08999
Torrubiella hemipterigena
VHEMI08999
N
X797_000968
Metarhizium robertsii
X797_000968
N
X797_003516
Metarhizium robertsii
X797_003516
N