CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB10294.1
Alternaria brassicicola
AB10294.1
I
AOL_s00006g157
Arthrobotrys oligospora
AOL_s00006g157
I
Bcin11g00730
Botrytis cinerea
Bcin11g00730
I
BGHDH14_bgh03873
Blumeria graminis
BGHDH14_bgh03873
I
COCC4DRAFT_20732
Bipolaris maydis
COCC4DRAFT_20732
I
COCCADRAFT_39951
Bipolaris zeicola
COCCADRAFT_39951
I
COCMIDRAFT_35015
Bipolaris oryzae
COCMIDRAFT_35015
I
COCSADRAFT_103706
Bipolaris sorokiniana
COCSADRAFT_103706
I
COCVIDRAFT_32043
Bipolaris victoriae
COCVIDRAFT_32043
I
CTHT_0009920
Chaetomium thermophilum
CTHT_0009920
I
DRE_02170
Drechslerella stenobrocha
DRE_02170
I
estExt_fgenesh1_pg.C_60367
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_60367
I
estExt_Genewise1.C_21713
Neurospora discreta
estExt_Genewise1.C_21713
I
EV44_g5959
Erysiphe necator
EV44_g5959
I
fgenesh1_pg.sca_1_chr1_3_0000074
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000074
I
H072_5364
Dactylellina haptotyla
H072_5364
I
M7I_1571
Glarea lozoyensis
M7I_1571
I
MAC_07140
Metarhizium acridum
MAC_07140
I
MAJ_04550
Metarhizium majus
MAJ_04550
I
MANI_013624
Metarhizium anisopliae
MANI_013624
I
MBM_05926
Marssonina brunnea
MBM_05926
I
MBR_06038
Metarhizium brunneum
MBR_06038
I
MGU_06439
Metarhizium guizhouense
MGU_06439
I
NCU02724
Neurospora crassa
NCU02724
D
NechaG74463
Fusarium solani
NechaG74463
I
NEUTE1DRAFT_126349
Neurospora tetrasperma
NEUTE1DRAFT_126349
I
OIDMADRAFT_121959
Oidiodendron maius
OIDMADRAFT_121959
I
PTRG_11389
Pyrenophora triticirepentis
PTRG_11389
I
PTT_08645
Pyrenophora teres
PTT_08645
I
S40285_05978
Stachybotrys chlorohalonata
S40285_05978
I
S40288_06808
Stachybotrys chartarum
S40288_06808
I
SBOR_9785
Sclerotinia borealis
SBOR_9785
I
SETTUDRAFT_141598
Setosphaeria turcica
SETTUDRAFT_141598
I
SMAC_04294
Sordaria macrospora
SMAC_04294
I
SS1G_14446
Sclerotinia sclerotiorum
SS1G_14446
I
X797_005794
Metarhizium robertsii
X797_005794
I