MDP0000726295 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000726295 T258772_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.741 0.741
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000726295 MADS box 1 28

Links

Other MADS box family TFs
Other Malus domestica TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001501 Calypte anna Aan_R001501 I
Aan_R009566 Calypte anna Aan_R009566 I
Afo_R010081 Aptenodytes forsteri Afo_R010081 I
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I
Alligator_sinensis_CCG020804.1 Alligator sinensis Alligator_sinensis_CCG020804.1 N
Brh_R008147 Buceros rhinoceros Brh_R008147 I
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I
UBP1 Anolis carolinensis ENSACAG00000013565 I
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I
ENSAMEG00000004034 Ailuropoda melanoleuca ENSAMEG00000004034 N
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I
UBP1 Bos taurus ENSBTAG00000003968 I
TFCP2L1 Bos taurus ENSBTAG00000007765 I
TFCP2L1 Canis familiaris ENSCAFG00000004788 I
TFCP2 Canis familiaris ENSCAFG00000007831 I
UBP1 Callithrix jacchus ENSCJAG00000012030 I
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I
TFCP2 Callithrix jacchus ENSCJAG00000017599 I
UBP1 Cavia porcellus ENSCPOG00000009270 I
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I
tfcp2l1 Danio rerio ENSDARG00000029497 N
tfcp2 Danio rerio ENSDARG00000060306 I
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I
Ubp1 Dipodomys ordii ENSDORG00000010133 I
UBP1 Equus caballus ENSECAG00000018555 I
TFCP2 Equus caballus ENSECAG00000020650 I
TFCP2L1 Equus caballus ENSECAG00000024837 I
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I
UBP1 Felis catus ENSFCAG00000006123 I
TFCP2L1 Felis catus ENSFCAG00000012143 I
ENSFCAG00000023653 Felis catus ENSFCAG00000023653 N
TFCP2 Felis catus ENSFCAG00000030292 I
TFCP2 Homo sapiens ENSG00000135457 D
UBP1 Homo sapiens ENSG00000153560 D
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I
TFCP2L1 Gallus gallus ENSGALG00000011635 I
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I
TFCP2L1 Microcebus murinus ENSMICG00000007161 I
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I
UBP1 Myotis lucifugus ENSMLUG00000010827 I
ENSMLUG00000030674 Myotis lucifugus ENSMLUG00000030674 N
TFCP2 Macaca mulatta ENSMMUG00000000152 I
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I
UBP1 Macaca mulatta ENSMMUG00000016917 I
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I
ENSMODG00000012723 Monodelphis domestica ENSMODG00000012723 N
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I
Tfcp2 Mus musculus ENSMUSG00000009733 I
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I
TFCP2 Otolemur garnettii ENSOGAG00000007969 I
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I
ubp1 Oryzias latipes ENSORLG00000011706 I
tfcp2 Oryzias latipes ENSORLG00000015644 I
ENSP00000257915 Macaca fascicularis ENSP00000257915 I
ENSP00000263707 Macaca fascicularis ENSP00000263707 I
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I
ENSP00000283629 Macaca fascicularis ENSP00000283629 I
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I
TFCP2 Pan troglodytes ENSPTRG00000004949 I
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I
UBP1 Pan troglodytes ENSPTRG00000014733 I
UBP1 Pteropus vampyrus ENSPVAG00000004158 I
Ubp1 Rattus norvegicus ENSRNOG00000009729 I
TFCP2 Sorex araneus ENSSARG00000002127 I
UBP1 Sorex araneus ENSSARG00000008670 I
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I
ENSSHAG00000016282 Sarcophilus harrisii ENSSHAG00000016282 N
UBP1 Sus scrofa ENSSSCG00000011235 I
TFCP2L1 Sus scrofa ENSSSCG00000015732 I
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I
ubp1 Takifugu rubripes ENSTRUG00000013570 I
pou6f1 Takifugu rubripes ENSTRUG00000014900 I
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I
TFCP2 Vicugna pacos ENSVPAG00000007617 I
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I
Gfo_R001211 Geospiza fortis Gfo_R001211 I
Gfo_R001955 Geospiza fortis Gfo_R001955 I
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I
Ogr16171 Ophisaurus gracilis Ogr16171 I
Pvit_06471 Pogona vitticeps Pvit_06471 I
Pvit_07455 Pogona vitticeps Pvit_07455 I
Pvit_07635 Pogona vitticeps Pvit_07635 I
Tal_R010177 Tyto alba Tal_R010177 I
Tal_R012945 Tyto alba Tal_R012945 I
ubp1.L Xenopus laevis XB-GENE-958764 N
tfcp2l1.L Xenopus laevis XB-GENE-997202 I