TFCP2 (Sorex araneus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSSARG00000002127 T199221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.990 0.990
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.903 0.903
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.903 0.903
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.903 0.903
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.893 0.893
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.893 0.893
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.893 0.893
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.893 0.893
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.864 0.864
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.864 0.864
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.864 0.864
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000001925 Grainyhead 1 107

Links

Other Grainyhead family TFs
Other Sorex araneus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 1.000
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.990
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.981
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.981
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.975
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.961
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.951
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.942
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.922
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.903
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.903
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.893
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.893
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.893
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.893
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.893
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.893
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.893
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.893
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.893
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.893
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.893
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.883
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.883
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.883
UBP1 Sorex araneus ENSSARG00000008670 I 0.883
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.883
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.864
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.845
Aan_R001501 Calypte anna Aan_R001501 I 0.845
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.845
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.845
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.845
Tal_R012945 Tyto alba Tal_R012945 I 0.845
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.816
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.806
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.796
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.796
ubp1 Oryzias latipes ENSORLG00000011706 I 0.796
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.796
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.786
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.777
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.767
ENSCING00000009038 Ciona intestinalis ENSCING00000009038 N 0.728
ENSFCAG00000023653 Felis catus ENSFCAG00000023653 N 0.728
ENSMLUG00000030674 Myotis lucifugus ENSMLUG00000030674 N 0.728
ubp1.L Xenopus laevis XB-GENE-958764 N 0.728
ENSLAFG00000031473 Loxodonta africana ENSLAFG00000031473 N 0.718
ENSSHAG00000001157 Sarcophilus harrisii ENSSHAG00000001157 I 0.717