Pavir.Ib03850 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Ib03850 T258931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib03850.1.p MADS box 10 55

Links

Other MADS box family TFs
Other Panicum virgatum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF555 Bos taurus ENSBTAG00000008397 I
ZNF555 Canis familiaris ENSCAFG00000031385 I
ZNF555 Callithrix jacchus ENSCJAG00000003485 I
ENSCSAG00000011462 Chlorocebus sabaeus ENSCSAG00000011462 I
ZNF555 Felis catus ENSFCAG00000022276 I
ZNF555 Homo sapiens ENSG00000186300 D
ZNF555 Gorilla gorilla ENSGGOG00000001761 I
ZNF555 Macaca mulatta ENSMMUG00000007485 I
ENSMPUG00000006605 Mustela putorius furo ENSMPUG00000006605 I
ENSNLEG00000002452 Nomascus leucogenys ENSNLEG00000002452 I
ENSOARG00000013428 Ovis aries ENSOARG00000013428 I
ZNF555 Otolemur garnettii ENSOGAG00000000383 I
ENSP00000334853 Macaca fascicularis ENSP00000334853 I
ZNF555 Pan troglodytes ENSPTRG00000010246 I