CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10002808m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10002808m.g
T259101_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10002808m
MADS box
40
84
SAKKKTDISRREQTLLNKAYELSTLCEIELCVIYYNRDGELIKTW
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_04200
Trichuris suis
D918_04200
N
EFV52511
Trichinella spiralis
EFV52511
N
LotgiG159035
Lottia gigantea
LotgiG159035
N
SPU_001113
Strongylocentrotus purpuratus
SPU_001113
N
TMUE_s0044003300
Trichuris muris
TMUE_s0044003300
N
TTRE_0000063401
Trichuris trichiura
TTRE_0000063401
N