Bra009715 (Brassica rapa)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02536 (mTERF) IPR003690 Bra009715 T262177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G23930
M06996_2.00 		Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND		 Dap-seq
OMalley et al.(2016)
AT5G23930_col_a 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009715.1-P mTERF 1 171

Links

Other mTERF family TFs
Other Brassica rapa TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G23930 Arabidopsis thaliana AT5G23930 D 0.759
Bostr.10199s0043 Boechera stricta Bostr.10199s0043 I 0.741
Cagra.0086s0019 Capsella grandiflora Cagra.0086s0019 I 0.771
Carubv10000909m.g Capsella rubella Carubv10000909m.g I 0.777
Thhalv10004187m.g Eutrema salsugineum Thhalv10004187m.g I 0.783