Bo7g105100 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g105100 T267516_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.909 0.957
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.909 0.957
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.909 0.957
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.888 0.915
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.850 0.915
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.849 0.894
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.839 0.872
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.832 0.872
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.821 0.851
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.814 0.809
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.814 0.809
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.808 0.787
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.808 0.787
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.808 0.787
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.789 0.809
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.789 0.809
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.783 0.830
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.712 0.809
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.712 0.809
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.712 0.809
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.709 0.681
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.709 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g105100.1 Myb 91 138

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

599 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27647.m000179 Ricinus communis 27647.m000179 I
29889.m003245 Ricinus communis 29889.m003245 I
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I
RR23 Oryza indica BGIOSGA005436 I
RR24 Oryza indica BGIOSGA007015 I
RR22 Oryza indica BGIOSGA022430 I
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I
Ca_02989 Cicer arietinum Ca_02989 I
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I
Cla009424 Citrullus lanatus Cla009424 I
Cla021325 Citrullus lanatus Cla021325 I
Cla022101 Citrullus lanatus Cla022101 I
CM1729.100.nc Lotus japonicus CM1729.100.nc I
Cucsa.252760 Cucumis sativus Cucsa.252760 I
Cucsa.271670 Cucumis sativus Cucsa.271670 I
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D
F775_13501 Aegilops tauschii F775_13501 I
F775_14758 Aegilops tauschii F775_14758 I
F775_19079 Aegilops tauschii F775_19079 I
F775_26936 Aegilops tauschii F775_26936 I
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I
gene15029-v1.0-hybrid Fragaria vesca gene15029-v1.0-hybrid I
GLYMA04G06650 Glycine max GLYMA04G06650 I
GLYMA06G06730 Glycine max GLYMA06G06730 I
GLYMA07G37220 Glycine max GLYMA07G37220 I
GLYMA14G13320 Glycine max GLYMA14G13320 I
GLYMA15G15520 Glycine max GLYMA15G15520 I
GLYMA17G03380 Glycine max GLYMA17G03380 I
GLYMA17G33230 Glycine max GLYMA17G33230 I
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I
GRMZM2G060485 Zea mays GRMZM2G060485 I
GRMZM2G401835 Zea mays GRMZM2G401835 I
GRMZM2G409974 Zea mays GRMZM2G409974 I
GRMZM2G479110 Zea mays GRMZM2G479110 I
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I
LPERR02G05460 Leersia perrieri LPERR02G05460 I
LPERR06G04900 Leersia perrieri LPERR06G04900 I
MDP0000224740 Malus domestica MDP0000224740 I
MDP0000290818 Malus domestica MDP0000290818 I
mgf001591m Mimulus guttatus mgf001591m I
mgf010113m Mimulus guttatus mgf010113m I
mgf012203m Mimulus guttatus mgf012203m I
mgf014863m Mimulus guttatus mgf014863m I
MLOC_11341 Hordeum vulgare MLOC_11341 I
MLOC_3955 Hordeum vulgare MLOC_3955 I
MLOC_61880 Hordeum vulgare MLOC_61880 I
MLOC_76165 Hordeum vulgare MLOC_76165 I
MTR_3g102590 Medicago truncatula MTR_3g102590 I
MTR_3g102600 Medicago truncatula MTR_3g102600 N
MTR_3g106220 Medicago truncatula MTR_3g106220 I
MTR_4g121020 Medicago truncatula MTR_4g121020 I
OB02G15530 Oryza brachyantha OB02G15530 I
OB02G42700 Oryza brachyantha OB02G42700 I
OB06G14930 Oryza brachyantha OB06G14930 I
OBART02G06200 Oryza barthii OBART02G06200 I
OBART06G05360 Oryza barthii OBART06G05360 I
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I
OLONG_005451 Oryza longistaminata OLONG_005451 I
OLONG_007266 Oryza longistaminata OLONG_007266 I
OMERI02G07120 Oryza meridionalis OMERI02G07120 I
OMERI06G06380 Oryza meridionalis OMERI06G06380 I
ONIVA02G07230 Oryza nivara ONIVA02G07230 I
ONIVA06G06160 Oryza nivara ONIVA06G06160 I
OPUNC06G05150 Oryza punctata OPUNC06G05150 I
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I
RR24 Oryza sativa OS02G0182100 I
RR23 Oryza sativa OS02G0796500 I
RR22 Oryza sativa OS06G0183100 I
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I
Pavir.J08270 Panicum virgatum Pavir.J08270 I
Pavir.J35630 Panicum virgatum Pavir.J35630 I
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I
PK02601.1 Cannabis sativa PK02601.1 I
PK26059.1 Cannabis sativa PK26059.1 I
Pm005710 Prunus mume Pm005710 I
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I
SapurV1A.0705s0030 Salix purpurea SapurV1A.0705s0030 I
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I
Sb04g005580 Sorghum bicolor Sb04g005580 I
Sb04g035980 Sorghum bicolor Sb04g035980 I
Sb05g004150 Sorghum bicolor Sb05g004150 I
Sb10g005580 Sorghum bicolor Sb10g005580 I
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I
Si006013m.g Setaria italica Si006013m.g I
Si016546m.g Setaria italica Si016546m.g I
Si016630m.g Setaria italica Si016630m.g I
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I
TCM_011067 Theobroma cacao TCM_011067 I
TCM_021300 Theobroma cacao TCM_021300 I
TCM_036926 Theobroma cacao TCM_036926 I
Traes_6AL_9C9D677D4 Triticum aestivum Traes_6AL_9C9D677D4 I
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I
TRIUR3_24314 Triticum urartu TRIUR3_24314 I
TRIUR3_26858 Triticum urartu TRIUR3_26858 I
TRIUR3_28229 Triticum urartu TRIUR3_28229 I
TRIUR3_31924 Triticum urartu TRIUR3_31924 I
ARR14 Vitis vinifera VIT_01s0011g05830 I
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I